RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PRRG2O14669 202 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 SS18L1O75177 396 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-203ENST00000463369 MRPL33O75394 65 aaKnown RBP7.05□□□□□ -1.28
SHQ1-203ENST00000463369 PPIAL4GP0DN37 164 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 SEC11AP67812 179 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 CATR1Q13166 79 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 FOXE3Q13461 319 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 CEACAM16Q2WEN9 425 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 FAM162BQ5T6X4 162 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 C9orf106Q8NAJ2 232 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 SSMEM1Q8WWF3 244 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 FAM168AQ92567 244 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 LINC00470Q9BZP3 86 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 TMEM191AQ9H0A3 160 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 MBNL3Q9NUK0 354 aaKnown RBP7.05□□□□□ -1.28
SHQ1-203ENST00000463369 FAM215AQ9Y5M1 114 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 POLEQ07864 2286 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-203ENST00000463369 CA6P23280 308 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 PPOXP50336 477 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 MFAP2P55001 183 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 GABRA6Q16445 453 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 WDR31Q8NA23 367 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 FAM222BQ8WU58 562 aa7.05□□□□□ -1.28
SHQ1-203ENST00000463369 RP1L1Q8IWN7 2480 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-203ENST00000463369 SPTA1P02549 2419 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 C9orf118A6NHY6 69 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 H3BS24 57 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 GNG7O60262 68 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 HBZP02008 142 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 MGST1P10620 155 aaKnown RBP7.04□□□□□ -1.28
SHQ1-203ENST00000463369 COL8A2P25067 703 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 RAB31Q13636 194 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 TMEM200BQ69YZ2 307 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 C22orf34Q6ZV56 151 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 MBD6Q96DN6 1003 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 POM121L2Q96KW2 1035 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 IGF2BP2-AS1Q96M15 143 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 TMEM167BQ9NRX6 74 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 H3BRM9 83 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 K7EP34 96 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 HAND1O96004 215 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 SMIM17P0DL12 118 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-203ENST00000463369 PSG5Q15238 335 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 TMEM97Q5BJF2 176 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 CD164L2Q6UWJ8 174 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 LINC00173Q6ZV60 143 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 AP1S3Q96PC3 154 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 OR2V2Q96R30 315 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
SHQ1-203ENST00000463369 IGSF10Q6WRI0 2623 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 SPRY2O43597 315 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 OR2H2O95918 312 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 OR9G9P0C7N8 305 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 COX8AP10176 69 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 HTR1DP28221 377 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 C2orf91Q6ZV80 131 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 RPRMLQ8N4K4 120 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
SHQ1-203ENST00000463369 SSBP3Q9BWW4 388 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-203ENST00000463369 U3KQE9 123 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 HCFC1P51610 2035 aa7.03□□□□□ -1.28
SHQ1-203ENST00000463369 A0A0G2JNJ9 132 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 A0A1B0GV72 72 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 VDAC2P45880 294 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-203ENST00000463369 GNG3P63215 75 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 FOXF2Q12947 444 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 GRAMD2BQ96HH9 432 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-203ENST00000463369 Q9UFV3 132 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 KALRNO60229 2985 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 LINC00473A8K010 186 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 GGTLC3B5MD39 225 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 IGHV3-9P01782 118 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 OR5AL1P0C617 328 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 AZU1P20160 251 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 BPIFA4PQ86YQ2 179 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 ABHD12Q8N2K0 398 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 CNEP1R1Q8N9A8 125 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 OR2K2Q8NGT1 345 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 GALMQ96C23 342 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 NPFFR1Q9GZQ6 430 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 ZNF355PQ9NSJ1 428 aa7.02□□□□□ -1.29
SHQ1-203ENST00000463369 PRR14LQ5THK1 2151 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 PPIAL4CA0A0B4J2A2 164 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 TMEM213A2RRL7 107 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 C5orf49A4QMS7 147 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 A6NDN8 102 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 H3BUT2 72 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 PPIFP30405 207 aaKnown RBP7.01□□□□□ -1.29
SHQ1-203ENST00000463369 LINC00205P59089 165 aa7.01□□□□□ -1.29
SHQ1-203ENST00000463369 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms