RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 C11orf68Q9H3H3 251 aaKnown RBP9.61□□□□□ -0.87
HDAC1-203ENST00000463172 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 RYR2Q92736 4967 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 FAM240BA0A1B0GVZ2 78 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 L7N2F9 121 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 TSC22D2O75157 780 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 SELENOTP62341 195 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 VAMP2P63027 116 aa9.6□□□□□ -0.87
HDAC1-203ENST00000463172 ZBTB8BQ8NAP8 495 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-203ENST00000463172 DYNC2H1Q8NCM8 4307 aaKnown RBP9.6□□□□□ -0.87
HDAC1-203ENST00000463172 TRAV6A0A075B6T7 132 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 FAM25EA8MYX2 175 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 PRSS46E5RG02 174 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 FNDC10F2Z333 226 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 PLA2G10O15496 165 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 IL5P05113 134 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 ORM2P19652 201 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 PSMB3P49720 205 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 RAP2BP61225 183 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 DLK1P80370 383 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 OR1B1Q8NGR6 318 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 ZNF431Q8TF32 576 aaPredicted RBP9.59□□□□□ -0.87
HDAC1-203ENST00000463172 LINC00052Q96N35 136 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
HDAC1-203ENST00000463172 NPVFQ9HCQ7 196 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 NUDT15Q9NV35 164 aa9.59□□□□□ -0.87
HDAC1-203ENST00000463172 IGKV1OR2-108A0A075B7D4 117 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 C5orf51A6NDU8 294 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 ISLRO14498 428 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 H2AFB2P0C5Z0 115 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 MIFP14174 115 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 PVALBP20472 110 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-203ENST00000463172 EBLN2Q6P2I7 272 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 CEMP1Q6PRD7 247 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-203ENST00000463172 CYP2G1PQ6ZSU1 146 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 GGACTQ9BVM4 153 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 SLC25A22Q9H936 323 aa9.58□□□□□ -0.88
HDAC1-203ENST00000463172 HYPMO75409 117 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 METTL15P1P0C7V9 234 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 HLA-DRB4P13762 266 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 TEPPQ6URK8 271 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 TMEM14EPQ6UXP3 125 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 FOXI2Q6ZQN5 318 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 C12orf45Q8N5I9 185 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-203ENST00000463172 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 RPRMQ9NS64 109 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 TBC1D24Q9ULP9 559 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
HDAC1-203ENST00000463172 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 H3BMM0 161 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 MBPP02686 304 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-203ENST00000463172 BCAP31P51572 246 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 RRAS2P62070 204 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-203ENST00000463172 RAB31Q13636 194 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 PXDC1Q5TGL8 231 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 GSG1LQ6UXU4 331 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 PHLDA1Q8WV24 401 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-203ENST00000463172 GPN1Q9HCN4 374 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-203ENST00000463172 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
HDAC1-203ENST00000463172 GOSR2O14653 212 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 OR5G3P0C626 314 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 LINC00869P0C866 280 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 RPL7P18124 248 aaKnown RBP9.55□□□□□ -0.88
HDAC1-203ENST00000463172 C4BPBP20851 252 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 ASAH1Q13510 395 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 ZNF546Q86UE3 836 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 C2orf50Q96LR7 162 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 RSG1Q9BU20 258 aa9.55□□□□□ -0.88
HDAC1-203ENST00000463172 SAV1Q9H4B6 383 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-203ENST00000463172 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
HDAC1-203ENST00000463172 LSM5Q9Y4Y9 91 aaKnown RBP9.55□□□□□ -0.88
HDAC1-203ENST00000463172 C7orf66A4D0T2 115 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
HDAC1-203ENST00000463172 C11orf94C9JXX5 98 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 K7EPK0 472 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 CCSO14618 274 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 DEDDO75618 318 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 GATA2P23769 480 aaPredicted RBP9.54□□□□□ -0.88
HDAC1-203ENST00000463172 CAV2P51636 162 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 PAX9P55771 341 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 PLP1P60201 277 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC1-203ENST00000463172 PLECQ15149 4684 aaKnown RBP9.54□□□□□ -0.88
HDAC1-203ENST00000463172 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 SEC22CQ9BRL7 303 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 SLC25A39Q9BZJ4 359 aaPredicted RBP9.54□□□□□ -0.88
HDAC1-203ENST00000463172 SLC25A32Q9H2D1 315 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 CLEC5AQ9NY25 188 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 PTTG2Q9NZH5 202 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 DOK5Q9P104 306 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
HDAC1-203ENST00000463172 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms