RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PSMB3P49720 205 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 LYZP61626 148 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 OR2F1Q13607 317 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 RBMY1FQ15415 496 aaKnown RBP5.28□□□□□ -1.56
PTPRF-210ENST00000463041 SPANXN5Q5MJ07 72 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 TMEM144Q7Z5S9 345 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 BPIFCQ8NFQ6 507 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 OR4D5Q8NGN0 318 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 PPP1R14BQ96C90 147 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 SMIM8Q96KF7 97 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 LINC00052Q96N35 136 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 HLA-DRB4X5D2U9 266 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 X6R8D5 127 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 IGHV4-28A0A0C4DH34 117 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 SMIM9A6NGZ8 99 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF98A6NK75 572 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 ISLRO14498 428 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 ADAP1O75689 374 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 C4BPBP20851 252 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 GALR1P47211 349 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 MEOX2P50222 304 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 FOXI2Q6ZQN5 318 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 S100A7AQ86SG5 101 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 GPR82Q96P67 336 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 NEU1Q99519 415 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 SDHCQ99643 169 aaPredicted RBP5.27□□□□□ -1.57
PTPRF-210ENST00000463041 WDR12Q9GZL7 423 aaKnown RBP5.27□□□□□ -1.57
PTPRF-210ENST00000463041 SAV1Q9H4B6 383 aaPredicted RBP5.27□□□□□ -1.57
PTPRF-210ENST00000463041 NPVFQ9HCQ7 196 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 CLEC5AQ9NY25 188 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 PSENENQ9NZ42 101 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 XCL2Q9UBD3 114 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 FLVCR2Q9UPI3 526 aa5.27□□□□□ -1.57
PTPRF-210ENST00000463041 ELOA3CA0A087WX78 387 aaPredicted RBP5.26□□□□□ -1.57
PTPRF-210ENST00000463041 TRAV10A0A0B4J240 114 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 LINC00854A0A1B0GVQ3 168 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 IGLL5B9A064 214 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 FNDC10F2Z333 226 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 SOCS3O14543 225 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 ORM2P19652 201 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 HLA-DMBP28068 263 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 TAS2R30P59541 319 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 SELENOTP62341 195 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 POLR2GP62487 172 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPRF-210ENST00000463041 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 EBLN2Q6P2I7 272 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 OR1B1Q8NGR6 318 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 MITD1Q8WV92 249 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 C16orf92Q96LL3 132 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 RSG1Q9BU20 258 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 TMEM147Q9BVK8 224 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 RPRMQ9NS64 109 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 RNF24Q9Y225 148 aa5.26□□□□□ -1.57
PTPRF-210ENST00000463041 TMEM189A5PLL7 270 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 PMS2P5A8MQ11 134 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 H3BP45 60 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 HYPMO75409 117 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 IL5P05113 134 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 IL7P13232 177 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 ANXA7P20073 488 aaKnown RBP5.25□□□□□ -1.57
PTPRF-210ENST00000463041 GATA2P23769 480 aaPredicted RBP5.25□□□□□ -1.57
PTPRF-210ENST00000463041 BTCP35070 178 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 PAX9P55771 341 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 PLP1P60201 277 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 DLK1P80370 383 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 PSG9Q00887 426 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 AKR1C1Q04828 323 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 IAH1Q2TAA2 248 aaPredicted RBP5.25□□□□□ -1.57
PTPRF-210ENST00000463041 GDF5OSQ5U4N7 250 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 TMEM14EPQ6UXP3 125 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF705AQ6ZN79 300 aaPredicted RBP5.25□□□□□ -1.57
PTPRF-210ENST00000463041 TMEM182Q6ZP80 229 aaPredicted RBP5.25□□□□□ -1.57
PTPRF-210ENST00000463041 CYP2G1PQ6ZSU1 146 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 OR10P1Q8NGE3 313 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 OR4B1Q8NGF8 309 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 SLC25A22Q9H936 323 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
PTPRF-210ENST00000463041 A0A0J9YX75 114 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 SMCO3A2RU48 225 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 A8MTW9 85 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF705FA8MVS1 300 aaPredicted RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 PLA2G10O15496 165 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 SSSCA1O60232 199 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 TSC22D2O75157 780 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 DEDDO75618 318 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 DUSP14O95147 198 aaKnown RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 IGKV3-20P01619 116 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF705DP0CH99 300 aaPredicted RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF705BP0CI00 300 aaPredicted RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 RPL7P18124 248 aaKnown RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 RAP2BP61225 183 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 C12orf74Q32Q52 190 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 FAM78BQ5VT40 261 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 TEPPQ6URK8 271 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 Q6ZTC4 211 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 ACOT7LQ6ZUV0 252 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 ZBTB8BQ8NAP8 495 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms