RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 OR8B3Q8NGG8 313 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 WIPF2Q8TF74 440 aaPredicted RBP13.48□□□□□ -0.25
ACTB-207ENST00000462494 IGFBPL1Q8WX77 278 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 OR8B2Q96RD0 313 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 DCHS2Q6V1P9 2916 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 RASL11AQ6T310 242 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 LINC00322Q6ZN03 302 aaPredicted RBP13.48□□□□□ -0.25
ACTB-207ENST00000462494 C18orf32Q8TCD1 76 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 KLF12Q9Y4X4 402 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 IGLC1P0CG04 106 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 MMDQ15546 238 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 RASL11BQ9BPW5 248 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 HILPDAQ9Y5L2 63 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 TIMM23O14925 209 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 TCRAP04437 139 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 FMC1Q96HJ9 113 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 C20orf144Q9BQM9 153 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 ABCA4P78363 2273 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 PTPRQQ9UMZ3 2332 aa13.47□□□□□ -0.25
ACTB-207ENST00000462494 VWC2LB2RUY7 222 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 TOMM40O96008 361 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 CD24P25063 80 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 PLP1P60201 277 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 NUTF2P61970 127 aaKnown RBP13.46□□□□□ -0.25
ACTB-207ENST00000462494 ARF6P62330 175 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 LDLRAD2Q5SZI1 272 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 MIEN1Q9BRT3 115 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 MLST8Q9BVC4 326 aa13.46□□□□□ -0.25
ACTB-207ENST00000462494 SLC25A39Q9BZJ4 359 aaPredicted RBP13.46□□□□□ -0.25
ACTB-207ENST00000462494 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
ACTB-207ENST00000462494 I3L2K1 104 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 CCL21O00585 134 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 P01737 135 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 LIPFP07098 398 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 RAB4AP20338 218 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 Q8N976 141 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 SPTA1P02549 2419 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 TRAV8-1A0A0A6YYK1 113 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 LY6LH3BQJ8 138 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 LTAP01374 205 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 CA7P43166 264 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 NIT1Q86X76 327 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 EXOC3-AS1Q8N2X6 119 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
ACTB-207ENST00000462494 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 CSMD1Q96PZ7 3565 aa13.45□□□□□ -0.26
ACTB-207ENST00000462494 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
ACTB-207ENST00000462494 ARHGAP32A7KAX9 2087 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 C3orf79P0CE67 100 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 A0A1W2PRD5 423 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 A0A1W2PRF3 423 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 A0A1W2PRM7 423 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 A6NNC1 897 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 TCAPO15273 167 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 PRB4P10163 310 aaPredicted RBP13.44□□□□□ -0.26
ACTB-207ENST00000462494 PGLYRP4Q96LB8 373 aa13.44□□□□□ -0.26
ACTB-207ENST00000462494 HSBP1O75506 76 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 HTR1DP28221 377 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 PAX2Q02962 417 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 MRPL27Q9P0M9 148 aaKnown RBP13.43□□□□□ -0.26
ACTB-207ENST00000462494 A8MWL6 223 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 KLRD1Q13241 179 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 CDSNQ15517 529 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 RNASEKQ6P5S7 137 aaKnown RBP13.43□□□□□ -0.26
ACTB-207ENST00000462494 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 ATP5L2Q7Z4Y8 100 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 PRNTQ86SH4 94 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 OR4B1Q8NGF8 309 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 GTSF1Q8WW33 167 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 RNF5Q99942 180 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 ALKBH7Q9BT30 221 aaPredicted RBP13.43□□□□□ -0.26
ACTB-207ENST00000462494 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 S4R3C0 116 aa13.43□□□□□ -0.26
ACTB-207ENST00000462494 HBBP68871 147 aa13.42□□□□□ -0.26
ACTB-207ENST00000462494 HES1Q14469 280 aa13.42□□□□□ -0.26
ACTB-207ENST00000462494 CIARTQ8N365 385 aaPredicted RBP13.42□□□□□ -0.26
ACTB-207ENST00000462494 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
ACTB-207ENST00000462494 A0A1B0GXF2 115 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 K7EIM0 57 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 SPATA45Q537H7 98 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
ACTB-207ENST00000462494 RAB1BQ9H0U4 201 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 DPM3Q9P2X0 92 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 C19orf71A6NCJ1 209 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 M0R2Z0 102 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 NBR2O15453 112 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 Q71RC1 249 aaPredicted RBP13.41□□□□□ -0.26
ACTB-207ENST00000462494 Q86TA4 180 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 C17orf77Q96MU5 243 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 RBM14Q96PK6 669 aaKnown RBP13.41□□□□□ -0.26
ACTB-207ENST00000462494 TMEM14CQ9P0S9 112 aa13.41□□□□□ -0.26
ACTB-207ENST00000462494 OR2J3O76001 311 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 COL8A1P27658 744 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
ACTB-207ENST00000462494 BATFQ16520 125 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms