RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 HES1Q14469 280 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 SMCO1Q147U7 214 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PSG5Q15238 335 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 IAH1Q2TAA2 248 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 LRRC75BQ2VPJ9 315 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 Q5BKY6 102 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 SAPCD1Q5SSQ6 148 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 TRPT1Q86TN4 253 aaKnown RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 AKAP14Q86UN6 197 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 RNASE11Q8TAA1 199 aaKnown RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 MRAPQ8TCY5 172 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 FLYWCH2Q96CP2 140 aaKnown RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 C2orf50Q96LR7 162 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PDCD10Q9BUL8 212 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 NMES1Q9C002 83 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 FBXL15Q9H469 300 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PLSCR3Q9NRY6 295 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 CACNG5Q9UF02 275 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 MLXQ9UH92 298 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 SVEP1Q4LDE5 3571 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ANK3Q12955 4377 aaKnown RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 A0A1B0GU03 582 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 A0A1B0GW64 132 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 E7EUB6 86 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 H3BUX3 64 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 K7EPK0 472 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 UPK2O00526 184 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ATG12O94817 140 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 MPC2O95563 127 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 MOSP00540 346 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 HBE1P02100 147 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 SLC25A6P12236 298 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 S100A1P23297 94 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 BRS3P32247 399 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 LGALS7P47929 136 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 DYNLT3P51808 116 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 UBE2KP61086 200 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 MMDQ15546 238 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 LY6EQ16553 131 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ATP6V1FQ16864 119 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 C5orf64Q2M2E5 130 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 VMA21Q3ZAQ7 101 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 MUC21Q5SSG8 566 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 C10orf55Q5SWW7 151 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 THOC7Q6I9Y2 204 aaKnown RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 TCTE3Q8IZS6 198 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 Q8N9W7 124 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 NPBQ8NG41 125 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 OR2T35Q8NGX2 323 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 OR2T10Q8NGZ9 312 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 OR1S1Q8NH92 325 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM167AQ8TBQ9 72 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 PPP1R1CQ8WVI7 109 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 SPIN2AQ99865 258 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 RNF5Q99942 180 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 SPIN2BQ9BPZ2 258 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 C11orf1Q9H5F2 150 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF430Q9H8G1 570 aaPredicted RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 ZFP57Q9NU63 452 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM14BQ9NUH8 114 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 COA4Q9NYJ1 87 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 OR5AC2Q9NZP5 309 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 GSKIPQ9P0R6 139 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 METTL1Q9UBP6 276 aaKnown RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 SIGLEC9Q9Y336 463 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 FBXO7Q9Y3I1 522 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 LSM5Q9Y4Y9 91 aaKnown RBP3.57□□□□□ -1.84
CSMD3-205ENST00000462254 HIVEP1P15822 2718 aa3.57□□□□□ -1.84
CSMD3-205ENST00000462254 IGHV4-4A0A075B6R2 117 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 TEX50A0A1B0GTY4 177 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 A6NDX4 124 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 CLDN34H7C241 214 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 DEDDO75618 318 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 CA2P00918 260 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 C1QBP02746 253 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 IAPPP10997 89 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 S100A10P60903 97 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 POLR2GP62487 172 aaKnown RBP eCLIP3.56□□□□□ -1.84
CSMD3-205ENST00000462254 CYCSP99999 105 aaKnown RBP3.56□□□□□ -1.84
CSMD3-205ENST00000462254 NDPQ00604 133 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 TNFRSF9Q07011 255 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 SPINK9Q5DT21 86 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF429Q86V71 674 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 PPP1R27Q86WC6 154 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 SIGLECL1Q8N7X8 197 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 C5orf56Q8N8D9 126 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 OR4A5Q8NH83 315 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 OR2T6Q8NHC8 308 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 GRPEL2Q8TAA5 225 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 VSTM2AQ8TAG5 236 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 ASB13Q8WXK3 278 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 C9orf85Q96MD7 179 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 HSPB9Q9BQS6 159 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms