RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 NAA60Q9H7X0 242 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 NAT8Q9UHE5 227 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 FOXA2Q9Y261 457 aaPredicted RBP8.68□□□□□ -1.02
APTX-209ENST00000460940 TET2Q6N021 2002 aaPredicted RBP8.67□□□□□ -1.02
APTX-209ENST00000460940 EGR2P11161 476 aaPredicted RBP8.67□□□□□ -1.02
APTX-209ENST00000460940 PSMB8P28062 276 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 PPIFP30405 207 aaKnown RBP8.67□□□□□ -1.02
APTX-209ENST00000460940 CNN1P51911 297 aaKnown RBP8.67□□□□□ -1.02
APTX-209ENST00000460940 TNXAQ16473 311 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 ATP6V1FQ16864 119 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 OR4D5Q8NGN0 318 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 OR5B12Q96R08 314 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 TMEM140Q9NV12 185 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 FUT9Q9Y231 359 aa8.67□□□□□ -1.02
APTX-209ENST00000460940 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 ZNF705FA8MVS1 300 aaPredicted RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 G3V318 75 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 SERPINE2P07093 398 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 ZNF705DP0CH99 300 aaPredicted RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 ZNF705BP0CI00 300 aaPredicted RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 STAG3L3P0CL85 134 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 RPL8P62917 257 aaKnown RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 KHDC1LQ5JSQ8 128 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 CYP2G1PQ6ZSU1 146 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 OR4F17Q8NGA8 305 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 SRSF12Q8WXF0 261 aaKnown RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 MS4A10Q96PG2 267 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 OR4F4Q96R69 305 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 TP53RKQ96S44 253 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 SPIN2AQ99865 258 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 SPIN2BQ9BPZ2 258 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 TRRAPQ9Y4A5 3859 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 ADARB2-AS1A8MUL3 147 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 H3BUA1 57 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 GALR1P47211 349 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 RPS20P60866 119 aaKnown RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 BAXQ07812 192 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 LGI3Q8N145 548 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 ANAPC16Q96DE5 110 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 FAM103A1Q9BTL3 118 aaKnown RBP8.66□□□□□ -1.02
APTX-209ENST00000460940 RNF24Q9Y225 148 aa8.66□□□□□ -1.02
APTX-209ENST00000460940 PLXNB1O43157 2135 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 TNCP24821 2201 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 H7BYZ3 331 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 UPK2O00526 184 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 CCL25O15444 150 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 IFNA1P01562 189 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 UBE2V1Q13404 147 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 NSUN5P1Q3KNT7 163 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 MYOZ3Q8TDC0 251 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
APTX-209ENST00000460940 VWFP04275 2813 aa8.65□□□□□ -1.02
APTX-209ENST00000460940 WNK1Q9H4A3 2382 aa8.65□□□□□ -1.03
APTX-209ENST00000460940 IGSF23A1L1A6 192 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 BRI3O95415 125 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 CDS2O95674 445 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 KRASP01116 189 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 PF4V1P10720 104 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 UCP1P25874 307 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
APTX-209ENST00000460940 TAS2R30P59541 319 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
APTX-209ENST00000460940 ALKBH7Q9BT30 221 aaPredicted RBP8.64□□□□□ -1.03
APTX-209ENST00000460940 GNG13Q9P2W3 67 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 PKD1L1Q8TDX9 2849 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 NDUFB8O95169 186 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 ESDP10768 282 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 G6PCP35575 357 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 SRPXP78539 464 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 ZNF695Q8IW36 515 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 OR4B1Q8NGF8 309 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 FAM110DQ8TAY7 271 aaPredicted RBP8.64□□□□□ -1.03
APTX-209ENST00000460940 TMEM37Q8WXS4 190 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 VAMP8Q9BV40 100 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 ELOVL1Q9BW60 279 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 COMMD5Q9GZQ3 224 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 TMEM222Q9H0R3 208 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 MAGT1Q9H0U3 335 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 PRNDQ9UKY0 176 aa8.64□□□□□ -1.03
APTX-209ENST00000460940 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
APTX-209ENST00000460940 IGKV1-39P01597 117 aa8.63□□□□□ -1.03
APTX-209ENST00000460940 IGKV1D-39P04432 117 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms