RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MFSD11O43934 449 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 IFNA14P01570 189 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 C1QAP02745 245 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 HLA-DQB2P05538 268 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 CFL1P23528 166 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 MIPP30301 263 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 ASIPP42127 132 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 SLCO1A2P46721 670 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 RPL14P50914 215 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 BLVRAP53004 296 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 UBE2G2P60604 165 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 RPL26P61254 145 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 HERVK_113P63121 156 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 MOGQ16653 247 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 DNAL1Q4LDG9 190 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 DRAM2Q6UX65 266 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 FAM151BQ6UXP7 276 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 OR51D1Q8NGF3 324 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 OR10D3Q8NH80 312 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 TSLPQ969D9 159 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 PPP1R14BQ96C90 147 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 TLCD1Q96CP7 247 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 MCEEQ96PE7 176 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 MGLLQ99685 303 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 TXNDC17Q9BRA2 123 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 SNRNP25Q9BV90 132 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 PARD6GQ9BYG4 376 aaPredicted RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 PARVAQ9NVD7 372 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 RPL26L1Q9UNX3 145 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 PLECQ15149 4684 aaKnown RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 MED12LQ86YW9 2145 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 IGHV3-15A0A0B4J1V0 119 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 A0A1W2PQL4 384 aaPredicted RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 ZNF860A6NHJ4 632 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 H3BPC8 53 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 COPEO14579 308 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 MRASO14807 208 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 AZIN1O14977 448 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 ATP8B1O43520 1251 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 NSA2O95478 260 aaKnown RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 ATP6V1G2O95670 118 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 LINC00614P0C842 121 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 PET100P0DJ07 73 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 GZMBP10144 247 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 IFI30P13284 250 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 CRHBPP24387 322 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 ATP6V0CP27449 155 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 OR10J1P30954 320 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 VBP1P61758 197 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 DEFB112Q30KQ8 113 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 Q5VSD8 79 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 DNM1P34Q6PK57 102 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 ATP5L2Q7Z4Y8 100 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 PDZD9Q8IXQ8 264 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 PLPP5Q8NEB5 264 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 RAB8BQ92930 207 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 TMBIM1Q969X1 311 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 DCUN1D1Q96GG9 259 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 Q9BRP9 147 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 MND1Q9BWT6 205 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 MROQ9BYG7 248 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 NKX6-2Q9C056 277 aaPredicted RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 EIF5A2Q9GZV4 153 aaKnown RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 SLC22A4Q9H015 551 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 FAM96AQ9H5X1 160 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 RNF122Q9H9V4 155 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 PAQR5Q9NXK6 330 aaPredicted RBP1.24□□□□□ -2.21
RFC4-211ENST00000460408 EMC3Q9P0I2 261 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 SNX12Q9UMY4 172 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 ATP6V1DQ9Y5K8 247 aa1.24□□□□□ -2.21
RFC4-211ENST00000460408 TINCRA0A1B0GVN0 87 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 MDFIC2A0A1B0GVS7 189 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CLDN25C9JDP6 229 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 H0YGG7 62 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 KCNK1O00180 336 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 SLC17A3O00476 420 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CCL22O00626 93 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CALB1P05937 261 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 HIST1H1CP16403 213 aaKnown RBP1.23□□□□□ -2.21
RFC4-211ENST00000460408 CXCL2P19875 107 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CXCL3P19876 107 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CMPK1P30085 196 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CD200P41217 278 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 ZNF140P52738 457 aaPredicted RBP1.23□□□□□ -2.21
RFC4-211ENST00000460408 HPCAP84074 193 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 SNCBQ16143 134 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 RGS21Q2M5E4 152 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CCSMST1Q4G0I0 132 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 KIAA2026Q5HYC2 2103 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 CLVS2Q5SYC1 327 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 NCBP2-AS2Q69YL0 99 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 DCUN1D2Q6PH85 259 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 GLT6D1Q7Z4J2 308 aa1.23□□□□□ -2.21
RFC4-211ENST00000460408 FAM19A5Q7Z5A7 132 aaPredicted RBP1.23□□□□□ -2.21
RFC4-211ENST00000460408 PHF13Q86YI8 300 aaPredicted RBP1.23□□□□□ -2.21
RFC4-211ENST00000460408 FUNDC1Q8IVP5 155 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms