RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FLNCQ14315 2725 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 WI2-2373I1.2A0A1W2PRP0 233 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 CLPSL1A2RUU4 121 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 C11orf94C9JXX5 98 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 PAGE4O60829 102 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 ATP6V1G1O75348 118 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 NDUFA7O95182 113 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 SNAPINO95295 136 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 S100A9P06702 114 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 LGALS1P09382 135 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 NBEAP1P0C6P0 100 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 BCL2P10415 239 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 PSMB8P28062 276 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 GCHFRP30047 84 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 ID1P41134 155 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 CDX1P47902 265 aaPredicted RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 UBE2G1P62253 170 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPL19P84098 196 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 MEF2BQ02080 365 aaPredicted RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 KLK9Q2XQG4 91 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF343Q6P1L6 599 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 Q6ZSV7 163 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 LYPD1Q8N2G4 141 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 SVBPQ8N300 66 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 EIF4E3Q8N5X7 224 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF491Q8N8L2 437 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 KLHL30-AS1Q8NEE0 82 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 LYPD6BQ8NI32 183 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 RXFP4Q8TDU9 374 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 BLNKQ8WV28 456 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR5B12Q96R08 314 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 TCEAL7Q9BRU2 100 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 NIPSNAP3BQ9BS92 247 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 GSX1Q9H4S2 264 aaPredicted RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 C16orf95Q9H693 158 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 VSIRQ9H7M9 311 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 SEPSECSQ9HD40 501 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 BIN3Q9NQY0 253 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 DAZ1Q9NQZ3 744 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 KLK9Q9UKQ9 250 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 TSSC4Q9Y5U2 329 aaPredicted RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 ARL2-SNX15V9GYD0 113 aa4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 HELZ2Q9BYK8 2649 aaKnown RBP4.55□□□□□ -1.68
RNU1-88P-201ENST00000459274 BSNQ9UPA5 3926 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGKV1OR2-108A0A075B7D4 117 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGHV3-35A0A0C4DH35 117 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 A0A1W2PRE2 83 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF98A6NK75 572 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF727A8MUV8 499 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 LINC01619G3V211 115 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM250H0YL14 139 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 K7EMT4 169 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 M0R036 132 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 DNASE2O00115 360 aaPredicted RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGKV1-17P01599 117 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 APOC3P02656 99 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPLP1P05386 114 aaKnown RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR10J4P0C629 311 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 HIST1H1EP10412 219 aaKnown RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 CNN1P51911 297 aaKnown RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 UBE2G2P60604 165 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 DEFA5Q01523 94 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 KRTAP1-1Q07627 177 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF506Q5JVG8 444 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 C19orf35Q6ZS72 473 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 LCNL1Q6ZST4 164 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 MIR17HGQ75NE6 70 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 GPHB5Q86YW7 130 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 C1QL4Q86Z23 238 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 DYNLRB2Q8TF09 96 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 C4orf3Q8WVX3 66 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 SLC50A1Q9BRV3 221 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 SHANK2-AS3Q9BTD1 123 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 SEC11CQ9BY50 192 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 MRPL27Q9P0M9 148 aaKnown RBP4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM14CQ9P0S9 112 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 HIVEP2P31629 2446 aa4.54□□□□□ -1.68
RNU1-88P-201ENST00000459274 FASNP49327 2511 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 UTP20O75691 2785 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGKV1D-37A0A075B6S9 117 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SERTM2A0A1B0GWG4 89 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PGPA6NDG6 321 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 FBLL1A6NHQ2 334 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PPP5D1E7EU14 171 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 NDUFS6O75380 124 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PF4P02776 101 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SFTA3P0C7M3 94 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 RANP62826 216 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SUMO1P63165 101 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PNRC1Q12796 327 aaPredicted RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PDE6HQ13956 83 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM241Q24JQ0 296 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF674Q2M3X9 581 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM95Q3KNT9 176 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 FBLN7Q53RD9 439 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 C19orf54Q5BKX5 351 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 GCSAMLQ5JQS6 135 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms