RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 RND1Q92730 232 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 HECTD1Q9ULT8 2610 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 DSCAMO60469 2012 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 PLCE1Q9P212 2302 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 SRD5A1P18405 259 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 CRYBB3P26998 211 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 BTF3L4Q96K17 158 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 ROS1P08922 2347 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 IGKV1OR2-108A0A075B7D4 117 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 TNFAIP6P98066 277 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 NABP2Q9BQ15 211 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 PLEKHA3Q9HB20 300 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 XGP55808 180 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 SELENOTP62341 195 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
SYNE2-207ENST00000458046 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
SYNE2-207ENST00000458046 ADGRG4Q8IZF6 3080 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 GP9P14770 177 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 FAM27E3Q08E93 113 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 DOLPP1Q86YN1 238 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF439Q8NDP4 499 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 CMTM2Q8TAZ6 248 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 NEUROG1Q92886 237 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 GAFA1Q96PS6 74 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 KALRNO60229 2985 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 TEX50A0A1B0GTY4 177 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 FCN1O00602 326 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 OR7C2O60412 319 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 IGHV1-46P01743 117 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 OR10J1P30954 320 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 SLC35B1P78383 322 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 ZCCHC24Q8N2G6 241 aaKnown RBP9.47□□□□□ -0.89
SYNE2-207ENST00000458046 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 FAM215AQ9Y5M1 114 aa9.47□□□□□ -0.89
SYNE2-207ENST00000458046 IGF2RP11717 2491 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 F2Z2F3 143 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 UPK2O00526 184 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 CRISP2P16562 243 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 FXYD3Q14802 87 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 CENPWQ5EE01 88 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 MMD2Q8IY49 270 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 ZADH2Q8N4Q0 377 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.89
SYNE2-207ENST00000458046 OR9G1Q8NH87 305 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.89
SYNE2-207ENST00000458046 PRNDQ9UKY0 176 aa9.46□□□□□ -0.89
SYNE2-207ENST00000458046 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 GNG4P50150 75 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 CCL8P80075 99 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 ASPHD1Q5U4P2 390 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 ZNF503Q96F45 646 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 TBX15Q96SF7 602 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 Q9H8V8 135 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.9
SYNE2-207ENST00000458046 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
SYNE2-207ENST00000458046 ITPR1Q14643 2758 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 SNURFLB1AK76 121 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 SERF1AO75920 110 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-207ENST00000458046 REG1BP48304 166 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 LINC00310P59036 64 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 PIP4P1Q86T03 277 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 LINC01356Q8N9X3 169 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 C11orf52Q96A22 123 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 V9GYV3 84 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 FBN2P35556 2912 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 SAA1P0DJI8 122 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-207ENST00000458046 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 RTL8BQ17RB0 113 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 BAGE3Q86Y29 109 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 OR2T6Q8NHC8 308 aa9.45□□□□□ -0.9
SYNE2-207ENST00000458046 ATMQ13315 3056 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 C9JCJ5 164 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 KIAA1644Q3SXP7 199 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms