RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 LYNX1G3V0Z9 82 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 CCL21O00585 134 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 HSBP1O75506 76 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 FAM87AP0C7U9 286 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 LYNX1P0DP58 116 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 PSG1P11464 419 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 S100A7P31151 101 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 CDKN1AP38936 164 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 KLRB1Q12918 225 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 BPIFA4PQ86YQ2 179 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 LYPD1Q8N2G4 141 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 NPBQ8NG41 125 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 C18orf32Q8TCD1 76 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 FAM168AQ92567 244 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 CBLN4Q9NTU7 201 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 OOSP1A8MZH6 123 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 H3BRN7 92 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 TIMM23O14925 209 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 EREGO14944 169 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 NDUFA3O95167 84 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 APELAP0DMC3 54 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 GPR6P46095 362 aaPredicted RBP8.69□□□□□ -1.02
RFX3-211ENST00000458034 NUTF2P61970 127 aaKnown RBP8.69□□□□□ -1.02
RFX3-211ENST00000458034 SLAQ13239 276 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 PMCHL1Q16048 86 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 CCDC144NLQ6NUI1 221 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
RFX3-211ENST00000458034 Q86TA4 180 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 KLHDC1Q8N7A1 406 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 MSRB2Q9Y3D2 182 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 PAM16Q9Y3D7 125 aa8.69□□□□□ -1.02
RFX3-211ENST00000458034 LOC105371242A0A075B767 164 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 NTF3P20783 257 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 KIR3DL3Q8N743 410 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 TMEM75Q8N9X5 138 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 ZNF48Q96MX3 618 aaPredicted RBP8.68□□□□□ -1.02
RFX3-211ENST00000458034 RCHY1Q96PM5 261 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
RFX3-211ENST00000458034 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 ZFP30Q9Y2G7 519 aa8.68□□□□□ -1.02
RFX3-211ENST00000458034 A0A1B0GW15 77 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 C20orf202A1L168 122 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 ODF3BA8MYP8 253 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 NPIPB6E9PJ23 425 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 K7EIM0 57 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 M0R2Z0 102 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 CHEK1O14757 476 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 HLA-DRB1P01911 266 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 PRTN3P24158 256 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 COL8A1P27658 744 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 CAMPP49913 170 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 MFAP4P55083 255 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 C1orf122Q6ZSJ8 110 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 NIT1Q86X76 327 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 CFHR4Q92496 578 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 CHCHD1Q96BP2 118 aaKnown RBP8.67□□□□□ -1.02
RFX3-211ENST00000458034 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
RFX3-211ENST00000458034 GSX1Q9H4S2 264 aaPredicted RBP8.67□□□□□ -1.02
RFX3-211ENST00000458034 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 WI2-2373I1.2A0A1W2PRP0 233 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 FBLL1A6NHQ2 334 aaKnown RBP8.66□□□□□ -1.02
RFX3-211ENST00000458034 TCAPO15273 167 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 SIAH2O43255 324 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 GNG7O60262 68 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 IGKV1-17P01599 117 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
RFX3-211ENST00000458034 C3orf79P0CE67 100 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 RNF224P0DH78 156 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
RFX3-211ENST00000458034 DLX1P56177 255 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 ARF6P62330 175 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 RIGQ13278 110 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 PDE6HQ13956 83 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 HES1Q14469 280 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 C5orf64Q2M2E5 130 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 MINOS1Q5TGZ0 78 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 LEMD1Q68G75 181 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 Q6AWC8 147 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
RFX3-211ENST00000458034 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 TCF24Q7RTU0 167 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 PRNTQ86SH4 94 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 Q8N976 141 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 THYN1Q9P016 225 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 UQCR10Q9UDW1 63 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 PLXNB1O43157 2135 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 WDFY4Q6ZS81 3184 aa8.66□□□□□ -1.02
RFX3-211ENST00000458034 TTC28Q96AY4 2481 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 POLEQ07864 2286 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms