RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CRLF1O75462 422 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 TSPAN9O75954 239 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 OR2C1O95371 312 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 IL4P05112 153 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 OR10J4P0C629 311 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 RD3LP0DJH9 198 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 GCHFRP30047 84 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 UBE2G2P60604 165 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 YPEL3P61236 119 aaPredicted RBP6.7□□□□□ -1.34
RIF1-208ENST00000457745 GUK1Q16774 197 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 DEFB136Q30KP8 78 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 IL34Q6ZMJ4 242 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 EIF4E3Q8N5X7 224 aaKnown RBP6.7□□□□□ -1.34
RIF1-208ENST00000457745 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 OR4X2Q8NGF9 303 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 LINC01006Q8NI28 216 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 WFDC12Q8WWY7 111 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 EEF1AKMT3Q96AZ1 226 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 RNF125Q96EQ8 232 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 PBDC1Q9BVG4 233 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 GNG13Q9P2W3 67 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 CDC42EP3Q9UKI2 254 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 TEP1Q99973 2627 aaKnown RBP6.7□□□□□ -1.34
RIF1-208ENST00000457745 IGHV4OR15-8A0A075B7B6 117 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 A0A087WW49 117 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 IGHV3-66A0A0C4DH42 116 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 FAM223BA6NKX1 122 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 H3BQ15 152 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 H3BUA1 57 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 CYB5BO43169 146 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 PAGE4O60829 102 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
RIF1-208ENST00000457745 CD28P10747 220 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 GP9P14770 177 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 ARL3P36405 182 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 NPBWR1P48145 328 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 CD81P60033 236 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 RPL15P61313 204 aaKnown RBP6.69□□□□□ -1.34
RIF1-208ENST00000457745 RAB31Q13636 194 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 ZNF506Q5JVG8 444 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 RBMS3Q6XE24 437 aaKnown RBP6.69□□□□□ -1.34
RIF1-208ENST00000457745 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 FAM223AQ8IWN6 122 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 TEX29Q8N6K0 151 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 KLHDC1Q8N7A1 406 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 RNF152Q8N8N0 203 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 OR5AU1Q8NGC0 362 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 LRRC20Q8TCA0 184 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 SLC25A39Q9BZJ4 359 aaPredicted RBP6.69□□□□□ -1.34
RIF1-208ENST00000457745 DNAJC4Q9NNZ3 241 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 C2CD3Q4AC94 2353 aa6.69□□□□□ -1.34
RIF1-208ENST00000457745 RBFOX3A6NFN3 312 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 I3L521 148 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 SLC17A3O00476 420 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 HYPMO75409 117 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 MBP02144 154 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 BCL2P10415 239 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 SELENOTP62341 195 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 RHOBP62745 196 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 FOXE3Q13461 319 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 ATRAIDQ6UW56 229 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 ZNF600Q6ZNG1 722 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 IQCF2Q8IXL9 164 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 SUN5Q8TC36 379 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 TXN2Q99757 166 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 SHANK2-AS3Q9BTD1 123 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 KCNIP2Q9NS61 270 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 THYN1Q9P016 225 aa6.68□□□□□ -1.34
RIF1-208ENST00000457745 NF1P21359 2839 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 TRBV7-1A0A0A6YYK4 115 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 A0A1W2PPV4 95 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 RAB19A4D1S5 217 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 GGTLC3B5MD39 225 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 NDUFB4O95168 129 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 PPT1P50897 306 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 GUCA2BQ16661 112 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 FAM90A2PQ658T7 463 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 ADAMTSL5Q6ZMM2 481 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.67□□□□□ -1.34
RIF1-208ENST00000457745 SPATA3Q8NHX4 192 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 ZNF418Q8TF45 676 aaPredicted RBP6.67□□□□□ -1.34
RIF1-208ENST00000457745 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 TREM1Q9NP99 234 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 ZNF586Q9NXT0 402 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 HIGD1AQ9Y241 93 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 U3KQE9 123 aa6.67□□□□□ -1.34
RIF1-208ENST00000457745 TRAV30A0A087WSZ9 112 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 TMEM218A2RU14 115 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms