RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
TMEM220-202ENST00000455996 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
TMEM220-202ENST00000455996 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
TMEM220-202ENST00000455996 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
TMEM220-202ENST00000455996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.5□□□□□ -0.41
TMEM220-202ENST00000455996 F8W036 122 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 PAGE4O60829 102 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 IL4P05112 153 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 SRD5A1P18405 259 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 FOXE3Q13461 319 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 ZNF343Q6P1L6 599 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 CLEC19AQ6UXS0 136 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 S100A7AQ86SG5 101 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 IQCF2Q8IXL9 164 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 OR5AU1Q8NGC0 362 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 DUX5Q96PT3 197 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 SLC25A39Q9BZJ4 359 aaPredicted RBP12.5□□□□□ -0.41
TMEM220-202ENST00000455996 SERTAD4Q9NUC0 356 aa12.5□□□□□ -0.41
TMEM220-202ENST00000455996 TMEM250H0YL14 139 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 H3BRN7 92 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 OR7C2O60412 319 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 ELANEP08246 267 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 CD99P14209 185 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 SLC35B1P78383 322 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 KIAA0141Q14154 515 aaPredicted RBP12.49□□□□□ -0.41
TMEM220-202ENST00000455996 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
TMEM220-202ENST00000455996 PAXXQ9BUH6 204 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 OR51M1Q9H341 326 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
TMEM220-202ENST00000455996 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMEM220-202ENST00000455996 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
TMEM220-202ENST00000455996 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
TMEM220-202ENST00000455996 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
TMEM220-202ENST00000455996 TEX38Q6PEX7 206 aa12.48□□□□□ -0.41
TMEM220-202ENST00000455996 ZNF329Q86UD4 541 aa12.48□□□□□ -0.41
TMEM220-202ENST00000455996 ZFAND3Q9H8U3 227 aa12.48□□□□□ -0.41
TMEM220-202ENST00000455996 A0A1W2PRE2 83 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 C11orf94C9JXX5 98 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 GP9P14770 177 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 HILS1P60008 231 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 SOHLH1Q5JUK2 328 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 CYB561D1Q8N8Q1 229 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 ZNF418Q8TF45 676 aaPredicted RBP12.47□□□□□ -0.41
TMEM220-202ENST00000455996 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
TMEM220-202ENST00000455996 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
TMEM220-202ENST00000455996 PDE6DO43924 150 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 APOC3P02656 99 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
TMEM220-202ENST00000455996 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 Q6ZSV7 163 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 CCDC28AQ8IWP9 274 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 RNF24Q9Y225 148 aa12.46□□□□□ -0.41
TMEM220-202ENST00000455996 F6UZH7 168 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 BMPR1BO00238 502 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 PYYP10082 97 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 S100A7P31151 101 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 ARL3P36405 182 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 ATP5G3P48201 142 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 UBE2G2P60604 165 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 C10orf99Q6UWK7 81 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 SVBPQ8N300 66 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 ZNF98A6NK75 572 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 PPP5D1E7EU14 171 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 MRPS12O15235 138 aaKnown RBP12.45□□□□□ -0.42
TMEM220-202ENST00000455996 OR10J4P0C629 311 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 NKX6-2Q9C056 277 aaPredicted RBP12.45□□□□□ -0.42
TMEM220-202ENST00000455996 C16orf95Q9H693 158 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 RABAC1Q9UI14 185 aa12.45□□□□□ -0.42
TMEM220-202ENST00000455996 NDUFA4O00483 81 aa12.44□□□□□ -0.42
TMEM220-202ENST00000455996 TRBV12-3P01733 135 aa12.44□□□□□ -0.42
TMEM220-202ENST00000455996 LEMD1Q68G75 181 aa12.44□□□□□ -0.42
TMEM220-202ENST00000455996 WIPF2Q8TF74 440 aaPredicted RBP12.44□□□□□ -0.42
TMEM220-202ENST00000455996 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
TMEM220-202ENST00000455996 MTORP42345 2549 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 IGHV3-11P01762 117 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 RPLP1P05386 114 aaKnown RBP12.43□□□□□ -0.42
TMEM220-202ENST00000455996 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
TMEM220-202ENST00000455996 NPPCP23582 126 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 MYCNOSP40205 109 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 FAM74A3Q4VXF1 159 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 JMJD8Q96S16 334 aa12.43□□□□□ -0.42
TMEM220-202ENST00000455996 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
TMEM220-202ENST00000455996 U3KQE9 123 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms