RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 SUB1P53999 127 aaKnown RBP eCLIP8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PAX2Q02962 417 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 DEFB113Q30KQ7 82 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C10orf113Q5VZT2 155 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LCN12Q6JVE5 192 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 VSTM2AQ8TAG5 236 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PERPQ96FX8 193 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PLPPR2Q96GM1 343 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 NDFIP1Q9BT67 221 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PRSS22Q9GZN4 317 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 RPP21Q9H633 154 aaKnown RBP8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 UBTD1Q9HAC8 227 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 BEX4Q9NWD9 120 aaPredicted RBP8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ADGRG4Q8IZF6 3080 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 MYO9AB2RTY4 2548 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 A0A1B0GW15 77 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TCRBV4S1A1TA0A5B7 111 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SLC35B1P78383 322 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 VAMP3Q15836 100 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TMEM177Q53S58 311 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TIMM23BQ5SRD1 257 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ETFRF1Q6IPR1 90 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ZNF833PQ6ZTB9 187 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 OR2Z1Q8NG97 314 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 OR9G1Q8NH87 305 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TMEM167AQ8TBQ9 72 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FXYD5Q96DB9 178 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 GPR82Q96P67 336 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ZNF355PQ9NSJ1 428 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 RPUSD1Q9UJJ7 312 aaKnown RBP8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PPIAL4AQ9Y536 164 aa8.06□□□□□ -1.12
CHCHD4P3-201ENST00000455954 IGHV1-18A0A0C4DH31 117 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 IGHV3-64DA0A0J9YX35 117 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C19orf71A6NCJ1 209 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SRRM4A7MD48 611 aaKnown RBP8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 IGHV3-13P01766 116 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 TFF1P04155 84 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CD3EP07766 207 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 RPL8P62917 257 aaKnown RBP8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SEC11AP67812 179 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PVRIGQ6DKI7 326 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 RBPMS2Q6ZRY4 209 aaKnown RBP8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SPATA12Q7Z6I5 190 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PDPNQ86YL7 162 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ATOH7Q8N100 152 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C8orf31Q8N9H6 132 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 OR10X1Q8NGY0 326 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FAM168AQ92567 244 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SSBP3Q9BWW4 388 aaPredicted RBP8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 HINT2Q9BX68 163 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SCRT2Q9NQ03 307 aa8.05□□□□□ -1.12
CHCHD4P3-201ENST00000455954 POLQO75417 2590 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LRBAP50851 2863 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 K7ERU9 68 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 HAX1O00165 279 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FSTL3O95633 263 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PLAUP00749 431 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CEACAM3P40198 252 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FABP6P51161 128 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PLP1P60201 277 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 MEF2CQ06413 473 aaPredicted RBP8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 C16orf54Q6UWD8 224 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LRRC75A-AS1Q8N1F1 130 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 H1FXQ92522 213 aaKnown RBP8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CCL19Q99731 98 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PEF1Q9UBV8 284 aaKnown RBP8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 DCHS2Q6V1P9 2916 aa8.04□□□□□ -1.12
CHCHD4P3-201ENST00000455954 RAI1Q7Z5J4 1906 aaPredicted RBP8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LOC102724200A0A096LPH7 203 aaPredicted RBP8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 CA1P00915 261 aaPredicted RBP8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LTAP01374 205 aa8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 BSPH1Q075Z2 132 aa8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 MAJINQ3KP22 176 aa8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
CHCHD4P3-201ENST00000455954 ZCCHC24Q8N2G6 241 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms