RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 OR5AC1P0C628 307 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 AZU1P20160 251 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 OR11H7Q8NGC8 314 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 LHFPL5Q8TAF8 219 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 RBPMSQ93062 196 aaKnown RBP16.13■□□□□ 0.17
PTPRA-208ENST00000455631 UHRF2Q96PU4 802 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 TMEM222Q9H0R3 208 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 COMMD3Q9UBI1 195 aa16.13■□□□□ 0.17
PTPRA-208ENST00000455631 CDS2O95674 445 aa16.12■□□□□ 0.17
PTPRA-208ENST00000455631 MEOX2P50222 304 aa16.12■□□□□ 0.17
PTPRA-208ENST00000455631 CNN1P51911 297 aaKnown RBP16.12■□□□□ 0.17
PTPRA-208ENST00000455631 B2MP61769 119 aa16.12■□□□□ 0.17
PTPRA-208ENST00000455631 MEF2DQ14814 521 aa16.12■□□□□ 0.17
PTPRA-208ENST00000455631 LYPD1Q8N2G4 141 aa16.12■□□□□ 0.17
PTPRA-208ENST00000455631 IGKV1D-37A0A075B6S9 117 aa16.11■□□□□ 0.17
PTPRA-208ENST00000455631 APOA1P02647 267 aa16.11■□□□□ 0.17
PTPRA-208ENST00000455631 CD3DP04234 171 aa16.11■□□□□ 0.17
PTPRA-208ENST00000455631 LSM3P62310 102 aaKnown RBP16.11■□□□□ 0.17
PTPRA-208ENST00000455631 FRZBQ92765 325 aa16.11■□□□□ 0.17
PTPRA-208ENST00000455631 PTTG2Q9NZH5 202 aa16.11■□□□□ 0.17
PTPRA-208ENST00000455631 A0A1W2PPQ1 181 aa16.1■□□□□ 0.17
PTPRA-208ENST00000455631 OR2F1Q13607 317 aa16.1■□□□□ 0.17
PTPRA-208ENST00000455631 SCGB2B2Q4G0G5 96 aa16.1■□□□□ 0.17
PTPRA-208ENST00000455631 MARCH1Q8TCQ1 289 aa16.1■□□□□ 0.17
PTPRA-208ENST00000455631 TRAV12-2A0A075B6T6 113 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 SNRPGP15A8MWD9 76 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 DUSP14O95147 198 aaKnown RBP16.09■□□□□ 0.17
PTPRA-208ENST00000455631 TNFAIP8O95379 198 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 FABP1P07148 127 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 FUSP35637 526 aaKnown RBP eCLIP16.09■□□□□ 0.17
PTPRA-208ENST00000455631 GALR1P47211 349 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 TMEM268Q5VZI3 342 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 GPR141Q7Z602 305 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 SELENOHQ8IZQ5 122 aaKnown RBP16.09■□□□□ 0.17
PTPRA-208ENST00000455631 GLYATL2Q8WU03 294 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 GNPNAT1Q96EK6 184 aaPredicted RBP16.09■□□□□ 0.17
PTPRA-208ENST00000455631 SLC35E1Q96K37 410 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 SLC25A32Q9H2D1 315 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 ZNF586Q9NXT0 402 aa16.09■□□□□ 0.17
PTPRA-208ENST00000455631 TEX13DA0A0J9YY54 714 aaPredicted RBP16.08■□□□□ 0.16
PTPRA-208ENST00000455631 GABARAPH6UMI1 98 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 GABARAPO95166 117 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 HTN1P15515 57 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 OR5I1Q13606 314 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 GAMTQ14353 236 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 OR4D10Q8NGI6 311 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 TERB2Q8NHR7 220 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 LINC01587Q99440 93 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 UPK3BQ9BT76 320 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 SLC25A22Q9H936 323 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 U3KQ87 197 aa16.08■□□□□ 0.16
PTPRA-208ENST00000455631 TRAV26-1A0A087WT03 109 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 TBPP20226 339 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 XGP55808 180 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 LGI3Q8N145 548 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 C16orf74Q96GX8 76 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 RSG1Q9BU20 258 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 NAA60Q9H7X0 242 aa16.07■□□□□ 0.16
PTPRA-208ENST00000455631 ZNF182P17025 639 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-208ENST00000455631 LINC00315P59091 139 aa16.06■□□□□ 0.16
PTPRA-208ENST00000455631 SLC25A39Q9BZJ4 359 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-208ENST00000455631 Q9H521 79 aa16.06■□□□□ 0.16
PTPRA-208ENST00000455631 CACFD1Q9UGQ2 172 aa16.06■□□□□ 0.16
PTPRA-208ENST00000455631 C14orf166Q9Y224 244 aaKnown RBP16.06■□□□□ 0.16
PTPRA-208ENST00000455631 TIMM8BQ9Y5J9 83 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-208ENST00000455631 A0A0J9YY99 117 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 BOLA2-SMG1P6H3BVE0 249 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 HPGDSO60760 199 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 SULT1A3P0DMM9 295 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 SULT1A4P0DMN0 295 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 IGFL4Q6B9Z1 124 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 RXFP4Q8TDU9 374 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 DTD1Q8TEA8 209 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 C17orf77Q96MU5 243 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 NOP10Q9NPE3 64 aaKnown RBP16.05■□□□□ 0.16
PTPRA-208ENST00000455631 PGPEP1Q9NXJ5 209 aa16.05■□□□□ 0.16
PTPRA-208ENST00000455631 FAT1Q14517 4588 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 M6PRP20645 277 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 TAS2R60P59551 318 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 ESRGQ1W209 222 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 TMEM256Q8N2U0 113 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 RNF182Q8N6D2 247 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 OR10J6PQ8NGY7 276 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 OR52I2Q8NH67 350 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 C18orf15Q96N68 181 aa16.04■□□□□ 0.16
PTPRA-208ENST00000455631 MRPS16Q9Y3D3 137 aaKnown RBP16.04■□□□□ 0.16
PTPRA-208ENST00000455631 MYCBP2O75592 4640 aa16.03■□□□□ 0.16
PTPRA-208ENST00000455631 GPX4P36969 197 aaPredicted RBP16.03■□□□□ 0.16
PTPRA-208ENST00000455631 TMEM144Q7Z5S9 345 aa16.03■□□□□ 0.16
PTPRA-208ENST00000455631 ZNF503Q96F45 646 aa16.03■□□□□ 0.16
PTPRA-208ENST00000455631 TRGV9Q99603 122 aa16.03■□□□□ 0.16
PTPRA-208ENST00000455631 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
PTPRA-208ENST00000455631 FLG2Q5D862 2391 aaPredicted RBP16.02■□□□□ 0.16
PTPRA-208ENST00000455631 FAM25AB3EWG3 89 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 FAM25CB3EWG5 89 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 FAM25GB3EWG6 89 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 EREGO14944 169 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 RAB3DO95716 219 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 ZNF738Q8NE65 137 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms