RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SBF1O95248 1867 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SLIT2O94813 1529 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TSC2P49815 1807 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SNRNP200O75643 2136 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 STRCQ7RTU9 1775 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PXDNQ92626 1479 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NUP205Q92621 2012 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 DDX60LQ5H9U9 1706 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ALS2Q96Q42 1657 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 DENND4CQ5VZ89 1909 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ALPK3Q96L96 1907 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ERCC6L2Q5T890 1561 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 XIRP1Q702N8 1843 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 TRAV1-1A0A0B4J248 108 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IGKV6-21A0A0C4DH24 114 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF736B4DX44 427 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 GGTLC3B5MD39 225 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 C12orf77C9JDV5 145 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM262E9PQX1 116 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 F6UB75 175 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SDCBPO00560 298 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PGLYRP1O75594 196 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 LSM8O95777 96 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CXorf1O96002 111 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CA2P00918 260 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 OXTP01178 125 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IGHV3-48P01763 117 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 HBE1P02100 147 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PRH1P02810 166 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IGKV3-11P04433 115 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 MRPL3P09001 348 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PTHLHP12272 177 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CRISP2P16562 243 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 GABRG2P18507 467 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IL3RAP26951 378 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RBMXP38159 391 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CA7P43166 264 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 NMUP48645 174 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 INSL3P51460 131 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SUB1P53999 127 aaKnown RBP eCLIP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CLDN6P56747 220 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RPL31P62899 125 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 HERVK_113P63121 156 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SLC38A11Q08AI6 406 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 LAMTOR4Q0VGL1 99 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IL15RAQ13261 267 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 GGTLC2Q14390 218 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 IHHQ14623 411 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF141Q15928 474 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ETDBQ3ZM63 59 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 NMSQ5H8A3 153 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 C1orf100Q5SVJ3 147 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 FAM27D1Q5T7N8 215 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 Q5XG85 94 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 LCN12Q6JVE5 192 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CYP2G1PQ6ZSU1 146 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RPS27LQ71UM5 84 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 BAGE3Q86Y29 109 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 BAGE2Q86Y30 109 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF695Q8IW36 515 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ATOH7Q8N100 152 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 EXOC3-AS1Q8N2X6 119 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 NPWQ8N729 165 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF740Q8NDX6 193 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 OR8B3Q8NGG8 313 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 OR9G1Q8NH87 305 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CLDND2Q8NHS1 167 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 JOSD2Q8TAC2 188 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 FAM213BQ8TBF2 198 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 STAG3L4Q8TBR4 150 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 MRPL30Q8TCC3 161 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SCGB1C1Q8TD33 95 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ARPC1AQ92747 370 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RDH5Q92781 318 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 EEF1AKMT3Q96AZ1 226 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RBMXL1Q96E39 390 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 NEURL3Q96EH8 262 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A44Q96H78 314 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 C2orf50Q96LR7 162 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PRELID3AQ96N28 172 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 OR8B2Q96RD0 313 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 GPR21Q99679 349 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A39Q9BZJ4 359 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM222Q9H0R3 208 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PDFQ9HBH1 243 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 BCL2L10Q9HD36 194 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ACER3Q9NUN7 267 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 C21orf62Q9NYP8 219 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 CALYQ9NYX4 217 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 TVP23BQ9NYZ1 205 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 PKIGQ9Y2B9 76 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 RCL1Q9Y2P8 373 aaKnown RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 KCNE3Q9Y6H6 103 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 SIPA1L3O60292 1781 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 BCORQ6W2J9 1755 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 ARFGEF2Q9Y6D5 1785 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 QSER1Q2KHR3 1735 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms