RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MAGT1Q9H0U3 335 aa6.74□□□□□ -1.33
COL8A1-203ENST00000452013 FNDC4Q9H6D8 234 aaPredicted RBP6.74□□□□□ -1.33
COL8A1-203ENST00000452013 DAZ1Q9NQZ3 744 aaKnown RBP6.74□□□□□ -1.33
COL8A1-203ENST00000452013 TRAV25A0A0B4J276 109 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 FAM74A7A6NL05 159 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 MT-ND4LP03901 98 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 BMI1P35226 326 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 TAGLN2P37802 199 aaKnown RBP6.73□□□□□ -1.33
COL8A1-203ENST00000452013 POLR2GP62487 172 aaKnown RBP eCLIP6.73□□□□□ -1.33
COL8A1-203ENST00000452013 S100A12P80511 92 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 EWSR1Q01844 656 aaKnown RBP eCLIP6.73□□□□□ -1.33
COL8A1-203ENST00000452013 GUK1Q16774 197 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 SPANXN5Q5MJ07 72 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 ADAMTSL5Q6ZMM2 481 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 RBPMS2Q6ZRY4 209 aaKnown RBP6.73□□□□□ -1.33
COL8A1-203ENST00000452013 HAPLN4Q86UW8 402 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 STX12Q86Y82 276 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 TMEM116Q8NCL8 245 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 OR10G4Q8NGN3 311 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 TMEM170AQ8WVE7 144 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 TCEAL7Q9BRU2 100 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 SLC35B3Q9H1N7 401 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 PSENENQ9NZ42 101 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 RCL1Q9Y2P8 373 aaKnown RBP6.73□□□□□ -1.33
COL8A1-203ENST00000452013 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
COL8A1-203ENST00000452013 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 VWFP04275 2813 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 IFNA5P01569 189 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 FABP1P07148 127 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 NPPCP23582 126 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 OR10J1P30954 320 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 RND2P52198 227 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
COL8A1-203ENST00000452013 PMS2P11Q13670 270 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 CD300EQ496F6 205 aaPredicted RBP6.72□□□□□ -1.33
COL8A1-203ENST00000452013 TOMM20LQ6UXN7 152 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 SLC16A13Q7RTY0 426 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 GTSCR1Q86UQ5 136 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 TMEM252Q8N6L7 170 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 ACY3Q96HD9 319 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 SLC35E1Q96K37 410 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 PSMG3Q9BT73 122 aaPredicted RBP6.72□□□□□ -1.33
COL8A1-203ENST00000452013 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
COL8A1-203ENST00000452013 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
COL8A1-203ENST00000452013 SMAD5-AS1Q9Y6J3 95 aa6.72□□□□□ -1.33
COL8A1-203ENST00000452013 A0A087WWC5 75 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV7-4-1A0A0J9YVY3 117 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 A0A1W2PS18 150 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 CXorf65A6NEN9 183 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF785A8K8V0 405 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF207O43670 478 aaKnown RBP6.71□□□□□ -1.34
COL8A1-203ENST00000452013 S100A8P05109 93 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 RD3LP0DJH9 198 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 SULT1A1P50225 295 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 SERF2P84101 59 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 TIGITQ495A1 244 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 ATP5SQ99766 215 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 RHPN1-AS1Q9BWJ2 59 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM231Q9H6L2 316 aa6.71□□□□□ -1.34
COL8A1-203ENST00000452013 MRPL36Q9P0J6 103 aaKnown RBP6.71□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 IZUMO1RA6ND01 250 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 C1orf196B1AJZ1 125 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 B4DEV8 164 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 SSSCA1O60232 199 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 IGLC1P0CG04 106 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 EDN2P20800 178 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 HBG1P69891 147 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 HBG2P69892 147 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 SRSF3P84103 164 aaKnown RBP6.7□□□□□ -1.34
COL8A1-203ENST00000452013 AKR1C1Q04828 323 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 GAMTQ14353 236 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 CLINT1Q14677 625 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 ATP6V1FQ16864 119 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 AKR1C8PQ5T2L2 129 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 OR2G3Q8NGZ4 309 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 GRAMD2BQ96HH9 432 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 METTL26Q96S19 204 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 SMIM3Q9BZL3 60 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
COL8A1-203ENST00000452013 WFDC1Q9HC57 220 aa6.7□□□□□ -1.34
COL8A1-203ENST00000452013 NBEAL1Q6ZS30 2694 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 COLCA2A8K830 154 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 H3BP45 60 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 CHEK1O14757 476 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 PLXNB1O43157 2135 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 TOMM40O96008 361 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-203ENST00000452013 ATP6V0CP27449 155 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 PPT1P50897 306 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms