RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 VOPP1Q96AW1 172 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 PSMB11A5LHX3 300 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 PSG3Q16557 428 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 D6R8Y8 96 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 TOMM40O96008 361 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 PLXNA4Q9HCM2 1894 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
ITGB4-202ENST00000449880 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
ITGB4-202ENST00000449880 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
ITGB4-202ENST00000449880 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV1-2P23083 117 aa11.46□□□□□ -0.57
ITGB4-202ENST00000449880 ZNF48Q96MX3 618 aaPredicted RBP11.46□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1-27A0A075B6S5 117 aa11.46□□□□□ -0.58
ITGB4-202ENST00000449880 SRSF6Q13247 344 aaKnown RBP11.46□□□□□ -0.58
ITGB4-202ENST00000449880 Q6ZWC4 215 aa11.46□□□□□ -0.58
ITGB4-202ENST00000449880 EFNA2O43921 213 aa11.46□□□□□ -0.58
ITGB4-202ENST00000449880 COA6Q5JTJ3 125 aaKnown RBP11.46□□□□□ -0.58
ITGB4-202ENST00000449880 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.58
ITGB4-202ENST00000449880 SEPSECSQ9HD40 501 aaKnown RBP11.46□□□□□ -0.58
ITGB4-202ENST00000449880 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 M0R2P5 195 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 S100A7L2Q5SY68 101 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 FOXL2NBQ6ZUU3 175 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 KLHDC3Q9BQ90 382 aa11.45□□□□□ -0.58
ITGB4-202ENST00000449880 TRBV20-1A0A075B6N2 111 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 LINC01587Q99440 93 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 SLC25A15Q9Y619 301 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 TRBV7-9A0A0J9YWB2 115 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 C9orf106Q8NAJ2 232 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 K7EP13 123 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 SIVA1O15304 175 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 DMRTA2Q96SC8 542 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 MLNRO43193 412 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 BOD1L2Q8IYS8 172 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 LIME1Q9H400 295 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 ARHGEF17Q96PE2 2063 aaPredicted RBP11.44□□□□□ -0.58
ITGB4-202ENST00000449880 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 FAM231DQ6ZW35 169 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 TRIOBPQ9H2D6 2365 aa11.44□□□□□ -0.58
ITGB4-202ENST00000449880 HEATR5BQ9P2D3 2071 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 COX8AP10176 69 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 ZNF329Q86UD4 541 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 NBR2O15453 112 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 CD59P13987 128 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 KLF12Q9Y4X4 402 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 FHL1Q13642 323 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 TAL2Q16559 108 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 TMEM155Q4W5P6 130 aa11.43□□□□□ -0.58
ITGB4-202ENST00000449880 CACNA1IQ9P0X4 2223 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 PINLYPA6NC86 204 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
ITGB4-202ENST00000449880 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 COLCA1Q6ZS62 124 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 E9PLN8 166 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 OVOL1O14753 267 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 FOXF2Q12947 444 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
ITGB4-202ENST00000449880 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 S4R3C0 116 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 LGALS1P09382 135 aaKnown RBP11.42□□□□□ -0.58
ITGB4-202ENST00000449880 NTF4P34130 210 aa11.42□□□□□ -0.58
ITGB4-202ENST00000449880 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
ITGB4-202ENST00000449880 HTN3P15516 51 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
ITGB4-202ENST00000449880 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 PRTN3P24158 256 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 RNF5Q99942 180 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 EP300Q09472 2414 aaPredicted RBP11.41□□□□□ -0.58
ITGB4-202ENST00000449880 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 DUSP14O95147 198 aaKnown RBP11.41□□□□□ -0.58
ITGB4-202ENST00000449880 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 TMEM167AQ8TBQ9 72 aa11.41□□□□□ -0.58
ITGB4-202ENST00000449880 A0A1W2PRX2 142 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 THBDP07204 575 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 EVI2AP22794 236 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 LGALS9CQ6DKI2 356 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 IGHV3-11P01762 117 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms