RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 IGKV1-39P01597 117 aa8.5□□□□□ -1.05
CTC1-202ENST00000449476 IGKV1D-39P04432 117 aa8.5□□□□□ -1.05
CTC1-202ENST00000449476 TCRAP04437 139 aa8.5□□□□□ -1.05
CTC1-202ENST00000449476 SIGLEC9Q9Y336 463 aa8.5□□□□□ -1.05
CTC1-202ENST00000449476 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 RNASE4P34096 147 aaKnown RBP8.49□□□□□ -1.05
CTC1-202ENST00000449476 GLMPQ8WWB7 406 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 RNF5Q99942 180 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
CTC1-202ENST00000449476 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 ITGB1BP1O14713 200 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 UBE2L6O14933 153 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 ERVK11-1P61568 191 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 DMRTA1Q5VZB9 504 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 RPRMLQ8N4K4 120 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 ZNRD1Q9P1U0 126 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 SPG11Q96JI7 2443 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.49□□□□□ -1.05
CTC1-202ENST00000449476 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
CTC1-202ENST00000449476 PLXNB3Q9ULL4 1909 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 C15orf32Q32M92 178 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 CYB5R2Q6BCY4 276 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 OR5AN1Q8NGI8 311 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 NEUROG1Q92886 237 aa8.49□□□□□ -1.05
CTC1-202ENST00000449476 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.48□□□□□ -1.05
CTC1-202ENST00000449476 BUB1B-PAK6H3BSN5 160 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 LY6HO94772 140 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 HBDP02042 147 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 LEPP41159 167 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 ACTL10Q5JWF8 245 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 FAM208BQ5VWN6 2430 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 H7C1H1 209 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 C5orf64Q2M2E5 130 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 PLCE1Q9P212 2302 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 PPBPP02775 128 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 RPL15P61313 204 aaKnown RBP8.48□□□□□ -1.05
CTC1-202ENST00000449476 PRR31Q5SQ13 230 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 FNDC10F2Z333 226 aa8.48□□□□□ -1.05
CTC1-202ENST00000449476 COL8A2P25067 703 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 IL15RAQ13261 267 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 TNFRSF18Q9Y5U5 241 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
CTC1-202ENST00000449476 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
CTC1-202ENST00000449476 PAX1P15863 534 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 EFNA4P52798 201 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 PAX8Q06710 450 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 CHCHD1Q96BP2 118 aaKnown RBP8.47□□□□□ -1.05
CTC1-202ENST00000449476 EP400Q96L91 3159 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 TNFSF13O75888 250 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
CTC1-202ENST00000449476 LINC00479Q96M42 142 aa8.47□□□□□ -1.05
CTC1-202ENST00000449476 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
CTC1-202ENST00000449476 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 E7EQL1 145 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.05
CTC1-202ENST00000449476 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 GOLGB1Q14789 3259 aaKnown RBP8.46□□□□□ -1.05
CTC1-202ENST00000449476 MED13Q9UHV7 2174 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 NUP210Q8TEM1 1887 aaPredicted RBP8.46□□□□□ -1.05
CTC1-202ENST00000449476 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.05
CTC1-202ENST00000449476 CD33P20138 364 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 CACNG7P62955 275 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 MINOS1Q5TGZ0 78 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 NUP35Q8NFH5 326 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 MINOS1-NBL1R4GNA1 71 aa8.46□□□□□ -1.05
CTC1-202ENST00000449476 A0A1W2PPI3 338 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 PSMB11A5LHX3 300 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 NPFFO15130 113 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 CD7P09564 240 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 TMEM219Q86XT9 240 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 ITLN2Q8WWU7 325 aaPredicted RBP8.46□□□□□ -1.06
CTC1-202ENST00000449476 TMEM14BQ9NUH8 114 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 ARFGEF3Q5TH69 2177 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 TRAV41A0A0B4J266 112 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 NDUFA3O95167 84 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 PFN1P07737 140 aaKnown RBP8.46□□□□□ -1.06
CTC1-202ENST00000449476 NUTF2P61970 127 aaKnown RBP8.46□□□□□ -1.06
CTC1-202ENST00000449476 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 RASL11AQ6T310 242 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 ACACBO00763 2458 aa8.46□□□□□ -1.06
CTC1-202ENST00000449476 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 DUX3Q96PT4 197 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 PTPRQQ9UMZ3 2332 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 F2Z2F3 143 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 EVI2AP22794 236 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 GATA4P43694 442 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
CTC1-202ENST00000449476 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms