RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZNF747Q9BV97 191 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 SLC39A9Q9NUM3 307 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 PUS1Q9Y606 427 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHMT2-203ENST00000449049 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 LINC01619G3V211 115 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 NDUFA4O00483 81 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 TSPAN15O95858 294 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 PLP1P60201 277 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 SERF2P84101 59 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 FHL3Q13643 280 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 OR1N2Q8NGR9 330 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 RAX2Q96IS3 184 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 GSN-AS1Q9NRJ2 163 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 IGHV3-35A0A0C4DH35 117 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 YIF1AO95070 293 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 RPEL1Q2QD12 228 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 TOMM20LQ6UXN7 152 aa10.78□□□□□ -0.68
SHMT2-203ENST00000449049 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-203ENST00000449049 NSUN5P1Q3KNT7 163 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 ANKRD39Q53RE8 183 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 FFAR4Q5NUL3 377 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
SHMT2-203ENST00000449049 TMEM88Q6PEY1 159 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 TMED6Q8WW62 240 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 RNF125Q96EQ8 232 aa10.77□□□□□ -0.69
SHMT2-203ENST00000449049 IL4P05112 153 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 Q6ZRG5 221 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 DPF1Q92782 380 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 RCC1LQ96I51 464 aaKnown RBP10.76□□□□□ -0.69
SHMT2-203ENST00000449049 CCL24O00175 119 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 ELLP55199 621 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-203ENST00000449049 LYZP61626 148 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 USF2Q15853 346 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-203ENST00000449049 UNQ9165/PRO28630Q6UXU0 137 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 DUX3Q96PT4 197 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
SHMT2-203ENST00000449049 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
SHMT2-203ENST00000449049 LGALS9O00182 355 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 ADCYAP1P18509 176 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 SLURP1P55000 103 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 RIPPLY3P57055 190 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-203ENST00000449049 FAM106AQ4KMX7 169 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 REC114Q7Z4M0 266 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 C1QL4Q86Z23 238 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 MBP02144 154 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 MYCNOSP40205 109 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-203ENST00000449049 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 PATE2Q6UY27 113 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 CBLN2Q8IUK8 224 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 C3orf56Q8N813 242 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 OR1L4Q8NGR5 311 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 OR1B1Q8NGR6 318 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 TMEM37Q8WXS4 190 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 PFDN5Q99471 154 aa10.75□□□□□ -0.69
SHMT2-203ENST00000449049 MRPL27Q9P0M9 148 aaKnown RBP10.75□□□□□ -0.69
SHMT2-203ENST00000449049 FBN1P35555 2871 aaKnown RBP10.74□□□□□ -0.69
SHMT2-203ENST00000449049 JMJD1CQ15652 2540 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 ELOA3CA0A087WX78 387 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-203ENST00000449049 UMAD1C9J7I0 102 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 HYPMO75409 117 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 ORM2P19652 201 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 TMEM41BQ5BJD5 291 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 PBDC1Q9BVG4 233 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 DOK5Q9P104 306 aa10.74□□□□□ -0.69
SHMT2-203ENST00000449049 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 A8MWP6 167 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 RAB2AP61019 212 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 AKR1C8PQ5T2L2 129 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 SFT2D1Q8WV19 159 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 K7EMT4 169 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 OR5G3P0C626 314 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 SULT1A2P50226 295 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 C10orf113Q5VZT2 155 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 OR10G4Q8NGN3 311 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 OR10G9Q8NGN4 311 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 OR10G7Q8NGN6 311 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 C20orf24Q9BUV8 137 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 RPRMQ9NS64 109 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 RABAC1Q9UI14 185 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 HIGD1AQ9Y241 93 aa10.73□□□□□ -0.69
SHMT2-203ENST00000449049 ZNF320A2RRD8 509 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 S100PP25815 95 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 RPP25LQ8N5L8 163 aaKnown RBP10.72□□□□□ -0.69
SHMT2-203ENST00000449049 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms