RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 C5orf30Q96GV9 206 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 NDUFA4L2Q9NRX3 87 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 CLEC2DQ9UHP7 191 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 YTHDF2Q9Y5A9 579 aaKnown RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 FLG2Q5D862 2391 aaPredicted RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 A0A0A6YYD4 124 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 ZNF705FA8MVS1 300 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 H3BMM0 161 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 CORTO00230 105 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 SULT1C2O00338 296 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 PDCD5O14737 125 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 CASQ2O14958 399 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 GSTZ1O43708 216 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 SCGNO76038 276 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 MT-CO2P00403 227 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 LALBAP00709 142 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 ZNF705DP0CH99 300 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 ZNF705BP0CI00 300 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 NUP62P37198 522 aaPredicted RBP4.02□□□□□ -1.77
USP49-205ENST00000448078 XGP55808 180 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 PSG9Q00887 426 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 WT1-ASQ06250 92 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 AADACL3Q5VUY0 350 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 CMTM1Q8IZ96 169 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 FAM24BQ8N5W8 94 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 OR4B1Q8NGF8 309 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 OR4C16Q8NGL9 310 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 MAFIPQ8WZ33 124 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 SLC5A7Q9GZV3 580 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 Q9H3A6 140 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 COMMD9Q9P000 198 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 LINC00588Q9Y4M8 146 aa4.02□□□□□ -1.77
USP49-205ENST00000448078 FOXI3A8MTJ6 420 aaPredicted RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 TNFSF12O43508 249 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 ATP5HO75947 161 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 TMEM50AO95807 157 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 KRASP01116 189 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 HIST1H1DP16402 221 aaKnown RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 PSMA1P25786 263 aaKnown RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 CRYBB3P26998 211 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 FCGR2CP31995 323 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 HSPA13P48723 471 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 GNG2P59768 71 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 CDNFQ49AH0 187 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 SAMD13Q5VXD3 122 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 ZFP1Q6P2D0 407 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 THAP8Q8NA92 274 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 OR10G8Q8NGN5 311 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 OR13F1Q8NGS4 319 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 OR10J6PQ8NGY7 276 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 OR6F1Q8NGZ6 308 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 COQ8AQ8NI60 647 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 GNPNAT1Q96EK6 184 aaPredicted RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 ZNF486Q96H40 463 aaPredicted RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 LINC00052Q96N35 136 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 ABHD1Q96SE0 405 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 MND1Q9BWT6 205 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 ATG5Q9H1Y0 275 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 FNDC4Q9H6D8 234 aaPredicted RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 ENY2Q9NPA8 101 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 NRN1Q9NPD7 142 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 DIABLOQ9NR28 239 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 AK6Q9Y3D8 172 aaKnown RBP4.01□□□□□ -1.77
USP49-205ENST00000448078 V9GY05 133 aa4.01□□□□□ -1.77
USP49-205ENST00000448078 TRAV3A0A0B4J244 114 aa4□□□□□ -1.77
USP49-205ENST00000448078 I3L2K1 104 aa4□□□□□ -1.77
USP49-205ENST00000448078 ATP8B1O43520 1251 aa4□□□□□ -1.77
USP49-205ENST00000448078 UCHL1P09936 223 aa4□□□□□ -1.77
USP49-205ENST00000448078 HLA-DRB4P13762 266 aa4□□□□□ -1.77
USP49-205ENST00000448078 F2RP25116 425 aa4□□□□□ -1.77
USP49-205ENST00000448078 LPAR6P43657 344 aa4□□□□□ -1.77
USP49-205ENST00000448078 CBX5P45973 191 aa4□□□□□ -1.77
USP49-205ENST00000448078 OR5I1Q13606 314 aa4□□□□□ -1.77
USP49-205ENST00000448078 IDNKQ5T6J7 187 aa4□□□□□ -1.77
USP49-205ENST00000448078 HACD4Q5VWC8 232 aa4□□□□□ -1.77
USP49-205ENST00000448078 SFXN4Q6P4A7 337 aa4□□□□□ -1.77
USP49-205ENST00000448078 H2BFWTQ7Z2G1 175 aa4□□□□□ -1.77
USP49-205ENST00000448078 BPIFB6Q8NFQ5 453 aa4□□□□□ -1.77
USP49-205ENST00000448078 OR51H1Q8NH63 302 aa4□□□□□ -1.77
USP49-205ENST00000448078 DCANP1Q8TF63 244 aa4□□□□□ -1.77
USP49-205ENST00000448078 UFD1Q92890 307 aa4□□□□□ -1.77
USP49-205ENST00000448078 CYYR1Q96J86 154 aa4□□□□□ -1.77
USP49-205ENST00000448078 PYGO2Q9BRQ0 406 aa4□□□□□ -1.77
USP49-205ENST00000448078 PDCD10Q9BUL8 212 aa4□□□□□ -1.77
USP49-205ENST00000448078 CCL28Q9NRJ3 127 aa4□□□□□ -1.77
USP49-205ENST00000448078 ZNF586Q9NXT0 402 aa4□□□□□ -1.77
USP49-205ENST00000448078 ANXA10Q9UJ72 324 aa4□□□□□ -1.77
USP49-205ENST00000448078 HLA-DRB4X5D2U9 266 aa4□□□□□ -1.77
USP49-205ENST00000448078 IGKV1D-13A0A0B4J2D9 117 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 ATG12O94817 140 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 OXTP01178 125 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 IGKV1-13P0DP09 117 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 S100A7P31151 101 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 CLDN12P56749 244 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 FXYD7P58549 80 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 HSPE1P61604 102 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms