RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 DCANP1Q8TF63 244 aa8.03□□□□□ -1.12
NPIPB3-202ENST00000448012 LINC00476Q8WZB0 136 aa8.03□□□□□ -1.12
NPIPB3-202ENST00000448012 RAB40CQ96S21 281 aa8.03□□□□□ -1.12
NPIPB3-202ENST00000448012 MAGT1Q9H0U3 335 aa8.03□□□□□ -1.12
NPIPB3-202ENST00000448012 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
NPIPB3-202ENST00000448012 TENM2Q9NT68 2774 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 PITX3O75364 302 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 NDUFB6O95139 128 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 OR2F1Q13607 317 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 C4orf46Q504U0 113 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 S100A7AQ86SG5 101 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 BPIFCQ8NFQ6 507 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 LINC00052Q96N35 136 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 TRGV9Q99603 122 aa8.02□□□□□ -1.13
NPIPB3-202ENST00000448012 SMCO3A2RU48 225 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 C11orf94C9JXX5 98 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 NKX2-1P43699 371 aaPredicted RBP8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 GALR1P47211 349 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 MEOX2P50222 304 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 NANOS2P60321 138 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 RRAS2P62070 204 aaPredicted RBP8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 EWSR1Q01844 656 aaKnown RBP eCLIP8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 ZNF90Q03938 601 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 CD300CQ08708 224 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 TMEM147Q9BVK8 224 aa8.01□□□□□ -1.13
NPIPB3-202ENST00000448012 C9orf170A2RU37 121 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 DEFB4AO15263 64 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 PSMB3P49720 205 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 TCTAP57738 103 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 EBLN2Q6P2I7 272 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 MED28Q9H204 178 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 RNF24Q9Y225 148 aa8□□□□□ -1.13
NPIPB3-202ENST00000448012 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 A6NJY4 79 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 H3BP45 60 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 IL5P05113 134 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 OR4E1P0C645 316 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 ORM2P19652 201 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 RAP2BP61225 183 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 THAP8Q8NA92 274 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 ST6GAL2Q96JF0 529 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 C16orf92Q96LL3 132 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 GPR82Q96P67 336 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 HRH4Q9H3N8 390 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 SLC25A22Q9H936 323 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 GPN1Q9HCN4 374 aaPredicted RBP7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 CLEC5AQ9NY25 188 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 PSENENQ9NZ42 101 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 XCL2Q9UBD3 114 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 MGAT4CQ9UBM8 478 aa7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
NPIPB3-202ENST00000448012 RYR3Q15413 4870 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 IGKV1D-37A0A075B6S9 117 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 H3BMM0 161 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 ISLRO14498 428 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 SSSCA1O60232 199 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 ADAP1O75689 374 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 SCGB1D2O95969 90 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 C4BPBP20851 252 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 ZFP69Q49AA0 526 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 FOXI2Q6ZQN5 318 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 ACOT7LQ6ZUV0 252 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 TCTE3Q8IZS6 198 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 Q8NAQ8 132 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 OR4B1Q8NGF8 309 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 OR1B1Q8NGR6 318 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 RPRMQ9NS64 109 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
NPIPB3-202ENST00000448012 DNAH7Q8WXX0 4024 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 IGLL5B9A064 214 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 L7N2F9 121 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 SSNA1O43805 119 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 ANXA7P20073 488 aaKnown RBP7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 SELENOTP62341 195 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 VAMP2P63027 116 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 ID3Q02535 119 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 FCN2Q15485 313 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 IAH1Q2TAA2 248 aaPredicted RBP7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 LGALS9CQ6DKI2 356 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 TMEM144Q7Z5S9 345 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 OR10P1Q8NGE3 313 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 OR4D5Q8NGN0 318 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 SMIM8Q96KF7 97 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 GSKIPQ9P0R6 139 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 FLVCR2Q9UPI3 526 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 GOLT1BQ9Y3E0 138 aa7.97□□□□□ -1.13
NPIPB3-202ENST00000448012 IGHV3OR16-12A0A075B7B8 117 aa7.96□□□□□ -1.14
NPIPB3-202ENST00000448012 TRAV10A0A0B4J240 114 aa7.96□□□□□ -1.14
NPIPB3-202ENST00000448012 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
NPIPB3-202ENST00000448012 ZNF98A6NK75 572 aa7.96□□□□□ -1.14
NPIPB3-202ENST00000448012 HYPMO75409 117 aa7.96□□□□□ -1.14
NPIPB3-202ENST00000448012 GIG44P09565 113 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms