RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 TWIST1Q15672 202 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 LY6EQ16553 131 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 CCDC144NLQ6NUI1 221 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
OTUD4-201ENST00000447906 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
OTUD4-201ENST00000447906 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 UCNP55089 124 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 OR2T8A6NH00 312 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 HBBP68871 147 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
OTUD4-201ENST00000447906 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
OTUD4-201ENST00000447906 OSTCQ9NRP0 149 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
OTUD4-201ENST00000447906 COL4A2P08572 1712 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 GPR183P32249 361 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 FXYD7P58549 80 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 SSBP2P81877 361 aaPredicted RBP11.28□□□□□ -0.6
OTUD4-201ENST00000447906 HCFC1P51610 2035 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
OTUD4-201ENST00000447906 M0R3E3 92 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
OTUD4-201ENST00000447906 LURAP1LQ8IV03 231 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
OTUD4-201ENST00000447906 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
OTUD4-201ENST00000447906 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 GOSR1O95249 250 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 HTN1P15515 57 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.6
OTUD4-201ENST00000447906 TM4SF20Q53R12 229 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 TEX45Q8NA69 505 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.6
OTUD4-201ENST00000447906 NAA38Q9BRA0 125 aaKnown RBP11.27□□□□□ -0.61
OTUD4-201ENST00000447906 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 M0QZK8 103 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
OTUD4-201ENST00000447906 CKS2P33552 79 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 ZNF841Q6ZN19 808 aa11.27□□□□□ -0.61
OTUD4-201ENST00000447906 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
OTUD4-201ENST00000447906 CFHR2P36980 270 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
OTUD4-201ENST00000447906 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 CDC42EP3Q9UKI2 254 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 NUDT3O95989 172 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 FBXL7Q9UJT9 491 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 LSM4Q9Y4Z0 139 aaKnown RBP11.26□□□□□ -0.61
OTUD4-201ENST00000447906 CEACAM8P31997 349 aaPredicted RBP11.26□□□□□ -0.61
OTUD4-201ENST00000447906 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 FNDC4Q9H6D8 234 aaPredicted RBP11.26□□□□□ -0.61
OTUD4-201ENST00000447906 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
OTUD4-201ENST00000447906 NPSP0C0P6 89 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 NMUP48645 174 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 NBR2O15453 112 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
OTUD4-201ENST00000447906 LOXP28300 417 aaPredicted RBP11.25□□□□□ -0.61
OTUD4-201ENST00000447906 MORN5Q5VZ52 161 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 NCKAP5O14513 1909 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 F5H697 171 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 PF4V1P10720 104 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
OTUD4-201ENST00000447906 GATA4P43694 442 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
OTUD4-201ENST00000447906 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
OTUD4-201ENST00000447906 TMEM208Q9BTX3 173 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 GNB1LQ9BYB4 327 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 NDUFA4L2Q9NRX3 87 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 RABAC1Q9UI14 185 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 C9JCJ5 164 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 COMPP49747 757 aaPredicted RBP11.24□□□□□ -0.61
OTUD4-201ENST00000447906 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
OTUD4-201ENST00000447906 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 F11RQ9Y624 299 aaKnown RBP11.24□□□□□ -0.61
OTUD4-201ENST00000447906 ZFYVE26Q68DK2 2539 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 E7EUB6 86 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 K7EN84 100 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 CX3CL1P78423 397 aa11.24□□□□□ -0.61
OTUD4-201ENST00000447906 KLRB1Q12918 225 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms