RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 KXD1Q9BQD3 176 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 PDFQ9HBH1 243 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 PTPRBP23467 1997 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 GP9P14770 177 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 KLF13Q9Y2Y9 288 aaPredicted RBP6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 PCSK5Q92824 1860 aa6.91□□□□□ -1.3
MCF2L2-203ENST00000447025 CPSF4LA6NMK7 179 aaKnown RBP6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 C11orf94C9JXX5 98 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 LYZL6O75951 148 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 RPL30P62888 115 aaKnown RBP6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 RFESDQ8TAC1 157 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 C18orf12Q96KH6 178 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 TTTY10Q9BZA0 68 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 ZNF442Q9H7R0 627 aa6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 ZNF256Q9Y2P7 627 aaPredicted RBP6.9□□□□□ -1.3
MCF2L2-203ENST00000447025 EMDP50402 254 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 Q6ZRU5 148 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 Q71RC1 249 aaPredicted RBP6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 ODF3L1Q8IXM7 274 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 TMEM158Q8WZ71 300 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 FOXB1Q99853 325 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 CHAC1Q9BUX1 264 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 PILRAQ9UKJ1 303 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 V9GYV3 84 aa6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 ARID1BQ8NFD5 2236 aaPredicted RBP6.9□□□□□ -1.31
MCF2L2-203ENST00000447025 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 NCBP2LA6PVI3 153 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 TIMM23O14925 209 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 CTLA4P16410 223 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 DUTP33316 252 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 UBE2E1P51965 193 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 VKORC1L1Q8N0U8 176 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 DCAF4L2Q8NA75 395 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 SRSF12Q8WXF0 261 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 UBE2E2Q96LR5 201 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 FOXC2Q99958 501 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 SCN2AQ99250 2005 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 LINC01548A6NM66 108 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 C2CD4DB7Z1M9 353 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 CDAP32320 146 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 ZNF136P52737 540 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 TMEM52BQ4KMG9 183 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 Q96M85 177 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 LINC00527Q9UJ94 153 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 TRIOO75962 3097 aa6.89□□□□□ -1.31
MCF2L2-203ENST00000447025 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 TMEM150CB9EJG8 249 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 SPRY3O43610 288 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 PPYP01298 95 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 GCHFRP30047 84 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 HOXD3P31249 432 aaPredicted RBP6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 EFNA4P52798 201 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 TET1Q8NFU7 2136 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 MYO16Q9Y6X6 1858 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 TRAV17A0A0B4J275 112 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 CST7O76096 145 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 GYPBP06028 91 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 COL8A2P25067 703 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
MCF2L2-203ENST00000447025 MYO7AQ13402 2215 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 SPRY2O43597 315 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 PSMB2P49721 201 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 LYZL2Q7Z4W2 148 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 HES7Q9BYE0 225 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 FAM60AQ9NP50 221 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 SERP1Q9Y6X1 66 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 PCDH15Q96QU1 1955 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 SSSCA1O60232 199 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 IL4P05112 153 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 UBE2D3P61077 147 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 UBE2D2P62837 147 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 LGALS9BQ3B8N2 356 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 C1orf100Q5SVJ3 147 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 LGALS9CQ6DKI2 356 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 FMC1Q96HJ9 113 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 EMC6Q9BV81 110 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 IL36RNQ9UBH0 155 aa6.87□□□□□ -1.31
MCF2L2-203ENST00000447025 IGKV6-21A0A0C4DH24 114 aa6.86□□□□□ -1.31
MCF2L2-203ENST00000447025 IZUMO1RA6ND01 250 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms