RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 ZFP30Q9Y2G7 519 aa17.33■□□□□ 0.36
SKIDA1-201ENST00000444772 MRPS16Q9Y3D3 137 aaKnown RBP17.33■□□□□ 0.36
SKIDA1-201ENST00000444772 RNF5Q99942 180 aa17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 SRSF8Q9BRL6 282 aaKnown RBP17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 CFAP47Q6ZTR5 3102 aa17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 IGHV1-3A0A0C4DH29 117 aa17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 EBLN2Q6P2I7 272 aa17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 SGK494Q96LW2 274 aa17.32■□□□□ 0.36
SKIDA1-201ENST00000444772 CEP250Q9BV73 2442 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 C2orf70A6NJV1 201 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 TEX22C9J3V5 150 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 E7EQL1 145 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 NPIPB6E9PJ23 425 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 RBP4P02753 201 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 NBL1P41271 181 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 DMRTA1Q5VZB9 504 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 GFRALQ6UXV0 394 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 LINC00322Q6ZN03 302 aaPredicted RBP17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 ZNF835Q9Y2P0 537 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 TRBV6-1A0A0K0K1D8 114 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 BUB1B-PAK6H3BSN5 160 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 RBPJQ06330 500 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 GTSF1Q8WW33 167 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 C1RLQ9NZP8 487 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 RNF24Q9Y225 148 aa17.31■□□□□ 0.36
SKIDA1-201ENST00000444772 RP1L1Q8IWN7 2480 aaPredicted RBP17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 IGLC1P0CG04 106 aa17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 CNTFRP26992 372 aa17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 APOBEC3AP31941 199 aaPredicted RBP17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 LCN12Q6JVE5 192 aa17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 TMEM70Q9BUB7 260 aa17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 ARFGEF3Q5TH69 2177 aa17.3■□□□□ 0.36
SKIDA1-201ENST00000444772 B9A039 149 aa17.29■□□□□ 0.36
SKIDA1-201ENST00000444772 Q86TA4 180 aa17.29■□□□□ 0.36
SKIDA1-201ENST00000444772 PSG1P11464 419 aa17.29■□□□□ 0.36
SKIDA1-201ENST00000444772 TSPOP30536 169 aa17.29■□□□□ 0.36
SKIDA1-201ENST00000444772 SLC25A39Q9BZJ4 359 aaPredicted RBP17.29■□□□□ 0.36
SKIDA1-201ENST00000444772 CRXO43186 299 aaPredicted RBP17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 Q56UQ5 140 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 PGLYRP4Q96LB8 373 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 NDFIP1Q9BT67 221 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 HOXB4P17483 251 aaPredicted RBP17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 LYZP61626 148 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 LEMD1Q68G75 181 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 ABHD17AQ96GS6 310 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 RASL11BQ9BPW5 248 aa17.28■□□□□ 0.36
SKIDA1-201ENST00000444772 I3L2K1 104 aa17.27■□□□□ 0.36
SKIDA1-201ENST00000444772 NPSP0C0P6 89 aa17.27■□□□□ 0.36
SKIDA1-201ENST00000444772 ATOH7Q8N100 152 aa17.27■□□□□ 0.36
SKIDA1-201ENST00000444772 SRSF12Q8WXF0 261 aaKnown RBP17.27■□□□□ 0.36
SKIDA1-201ENST00000444772 URB1-AS1Q96HZ7 61 aa17.27■□□□□ 0.36
SKIDA1-201ENST00000444772 IGHV3-21A0A0B4J1V1 117 aa17.27■□□□□ 0.35
SKIDA1-201ENST00000444772 COL8A1P27658 744 aa17.27■□□□□ 0.35
SKIDA1-201ENST00000444772 LHFPL4Q7Z7J7 247 aa17.27■□□□□ 0.35
SKIDA1-201ENST00000444772 SH3BGRL2Q9UJC5 107 aa17.27■□□□□ 0.35
SKIDA1-201ENST00000444772 APELAP0DMC3 54 aa17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 RPEQ96AT9 228 aa17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 HAX1O00165 279 aa17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 PLXNB1O43157 2135 aa17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 FOXA3P55318 350 aaPredicted RBP17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 C16orf54Q6UWD8 224 aa17.26■□□□□ 0.35
SKIDA1-201ENST00000444772 CHEK1O14757 476 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 STPG4Q8N801 248 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 SCNM1Q9BWG6 230 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 PPP1R14DQ9NXH3 145 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 OR5AL1P0C617 328 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 TFPI2P48307 235 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 Q8NA96 180 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 BOD1L1Q8NFC6 3051 aa17.25■□□□□ 0.35
SKIDA1-201ENST00000444772 LOC102724200A0A096LPH7 203 aaPredicted RBP17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 FAM120AOSQ5T036 256 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 LYPD1Q8N2G4 141 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 FBXL15Q9H469 300 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 GSX1Q9H4S2 264 aaPredicted RBP17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 H3BTX0 84 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 IGLV2-11P01706 119 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 SPTBN2O15020 2390 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 CD3EP07766 207 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 MAJINQ3KP22 176 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 BPIFA4PQ86YQ2 179 aa17.24■□□□□ 0.35
SKIDA1-201ENST00000444772 IGLL1P15814 213 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 GOLT1AQ6ZVE7 132 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 TMEM75Q8N9X5 138 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 PPIAL4CA0A0B4J2A2 164 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 K7EQM0 130 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 PPIAL4GP0DN37 164 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 SHANK2-AS3Q9BTD1 123 aa17.23■□□□□ 0.35
SKIDA1-201ENST00000444772 ZGRF1Q86YA3 2104 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 ROS1P08922 2347 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 IGHV1-24A0A0C4DH33 117 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 LY6LH3BQJ8 138 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 IGKV1-17P01599 117 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 PLGLAQ15195 96 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 PRNTQ86SH4 94 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 OR4F17Q8NGA8 305 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 ORAOV1Q8WV07 137 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 ST20Q9HBF5 79 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 LEPROTL1O95214 131 aa17.22■□□□□ 0.35
SKIDA1-201ENST00000444772 APOHP02749 345 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms