RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FHL1Q13642 323 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 C16orf47Q6ZP98 133 aaPredicted RBP4.23□□□□□ -1.73
SCN11A-202ENST00000444237 Q6ZRM9 215 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 MDP1Q86V88 176 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 FOXI3A8MTJ6 420 aaPredicted RBP4.23□□□□□ -1.73
SCN11A-202ENST00000444237 ALKBH6Q3KRA9 238 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 C6orf15Q6UXA7 325 aaPredicted RBP4.23□□□□□ -1.73
SCN11A-202ENST00000444237 CALYQ9NYX4 217 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 MYO9BQ13459 2157 aa4.23□□□□□ -1.73
SCN11A-202ENST00000444237 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 NPFFO15130 113 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 WNT2P09544 360 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 ID1P41134 155 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FXYD2P54710 66 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF329Q86UD4 541 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 LRRC75A-AS1Q8N1F1 130 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 ZC2HC1AQ96GY0 325 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 TRBV25-1A0A075B6N4 114 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 NTF4P34130 210 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 SYNJ2BPP57105 145 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 TCF15Q12870 199 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF497Q6ZNH5 498 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 PCP2Q8IVA1 136 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
SCN11A-202ENST00000444237 ASCL2Q99929 193 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 MRPL20Q9BYC9 149 aaKnown RBP4.22□□□□□ -1.73
SCN11A-202ENST00000444237 TNFRSF18Q9Y5U5 241 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 SCN3AQ9NY46 2000 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 YLPM1P49750 1951 aaKnown RBP4.22□□□□□ -1.73
SCN11A-202ENST00000444237 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 IGHV3-21A0A0B4J1V1 117 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 SPTY2D1-AS1A0A0U1RR47 76 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 UQCRQO14949 82 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 SPINK2P20155 84 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 LTBRP36941 435 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 PRCDQ00LT1 54 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 GLMPQ8WWB7 406 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 DNAJC30Q96LL9 226 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 LINC00479Q96M42 142 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 DUX5Q96PT3 197 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 IGHV5-51A0A0C4DH38 117 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 C2orf70A6NJV1 201 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FAM90A27PA6NNH2 459 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 NCR2O95944 276 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FGF6P10767 208 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 LIFP15018 202 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 HCP5Q6MZN7 132 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FAM57AQ8TBR7 257 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 TDRD6O60522 2096 aaKnown RBP4.22□□□□□ -1.73
SCN11A-202ENST00000444237 IGKV1-12A0A0C4DH73 117 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 SPRY3O43610 288 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 IGKV1D-12P01611 117 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FXYD7P58549 80 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 FAM104BQ5XKR9 115 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 MOB4Q9Y3A3 225 aa4.22□□□□□ -1.73
SCN11A-202ENST00000444237 DOCK11Q5JSL3 2073 aa4.21□□□□□ -1.73
SCN11A-202ENST00000444237 WIPF3A6NGB9 483 aa4.21□□□□□ -1.73
SCN11A-202ENST00000444237 PATE3B3GLJ2 98 aa4.21□□□□□ -1.73
SCN11A-202ENST00000444237 CEACAM4O75871 244 aa4.21□□□□□ -1.73
SCN11A-202ENST00000444237 FOXA2Q9Y261 457 aaPredicted RBP4.21□□□□□ -1.73
SCN11A-202ENST00000444237 RALGAPA2Q2PPJ7 1873 aa4.21□□□□□ -1.73
SCN11A-202ENST00000444237 SMIM9A6NGZ8 99 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 UPK2O00526 184 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 NPC2P61916 151 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 TRIP6Q15654 476 aaKnown RBP4.21□□□□□ -1.74
SCN11A-202ENST00000444237 C19orf54Q5BKX5 351 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 SHISA2Q6UWI4 295 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 F5H768 121 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 ARMS2P0C7Q2 107 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 RPL39P5Q59GN2 51 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 PRR31Q5SQ13 230 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 Q86TA4 180 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 LCTP09848 1927 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 NRN1LQ496H8 165 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 GTSF1Q8WW33 167 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 RNF7Q9UBF6 113 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 HEATR5AQ86XA9 2040 aa4.21□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1BA6NDE4 496 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1EA6NEQ0 496 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 E9PLD3 99 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 NDUFS7O75251 213 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 AGFG2O95081 481 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1DP0C7P1 496 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1A1P0DJD3 496 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1CP0DJD4 496 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 DUTP33316 252 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 PRR7Q8TB68 274 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 REPIN1Q9BWE0 567 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 IGKV3-11P04433 115 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 THBDP07204 575 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 CD3EP07766 207 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RBMY1FQ15415 496 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 UFSP1Q6NVU6 142 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 RNF144BQ7Z419 303 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms