RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TFF1P04155 84 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 IGKV1-13P0DP09 117 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 COL8A2P25067 703 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 FOXC2Q99958 501 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 NHLRC3Q5JS37 347 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 FAM89BQ8N5H3 189 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 H0YJW9 148 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 CCL20P78556 96 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 GAFA1Q96PS6 74 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 A0A1W2PRE2 83 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 UBE2E1P51965 193 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
FN1-211ENST00000443816 NR2C2APQ86WQ0 139 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
FN1-211ENST00000443816 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 OTX1P32242 354 aaPredicted RBP9.22□□□□□ -0.93
FN1-211ENST00000443816 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 PSPNO60542 156 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 TECTAO75443 2155 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 DPRXA6NFQ7 191 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 CD28P10747 220 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 PRTN3P24158 256 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 EFNB3Q15768 340 aa9.22□□□□□ -0.93
FN1-211ENST00000443816 CDK2AP2O75956 126 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 AMBPP02760 352 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 EGR1P18146 543 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 COQ2Q96H96 371 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 SIGLEC9Q9Y336 463 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 COL4A4P53420 1690 aaPredicted RBP9.21□□□□□ -0.93
FN1-211ENST00000443816 CD55P08174 381 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 PLP1P60201 277 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 CD177Q8N6Q3 437 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 A0A1B0GWJ7 208 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 MPTX1A8MV57 137 aa9.21□□□□□ -0.93
FN1-211ENST00000443816 RPL15P61313 204 aaKnown RBP9.21□□□□□ -0.94
FN1-211ENST00000443816 B3GALT5-AS1P59052 145 aa9.21□□□□□ -0.94
FN1-211ENST00000443816 FBLN7Q53RD9 439 aa9.21□□□□□ -0.94
FN1-211ENST00000443816 C9orf139Q6ZV77 190 aa9.21□□□□□ -0.94
FN1-211ENST00000443816 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.94
FN1-211ENST00000443816 ZNF138P52744 262 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 DAZ1Q9NQZ3 744 aaKnown RBP9.2□□□□□ -0.94
FN1-211ENST00000443816 J3QRE1 110 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 LYPD3O95274 346 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
FN1-211ENST00000443816 GNG5P63218 68 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 MESP1Q9BRJ9 268 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 FAM208BQ5VWN6 2430 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 SLC17A3O00476 420 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 ATP5G3P48201 142 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 OTOGLQ3ZCN5 2332 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 PMS2P5A8MQ11 134 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 PIP4P1Q86T03 277 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 PSG1P11464 419 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 HAPLN4Q86UW8 402 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 LINC00469Q8N7U9 141 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 EML5Q05BV3 1969 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 APOMO95445 188 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 IGHV1-69P01742 117 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 TTC32Q5I0X7 151 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 WFDC12Q8WWY7 111 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 ZNF319Q9P2F9 582 aa9.2□□□□□ -0.94
FN1-211ENST00000443816 SRRM4A7MD48 611 aaKnown RBP9.19□□□□□ -0.94
FN1-211ENST00000443816 LINC01619G3V211 115 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 K7ERU9 68 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 PLNP26678 52 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 FCN3O75636 299 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 TOMM40O96008 361 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 CLPSP04118 112 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
FN1-211ENST00000443816 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 EFNA2O43921 213 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 IGHV2-70DA0A0C4DH43 119 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 CEACAM8P31997 349 aaPredicted RBP9.19□□□□□ -0.94
FN1-211ENST00000443816 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
FN1-211ENST00000443816 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
FN1-211ENST00000443816 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
FN1-211ENST00000443816 A0A0A6YYD4 124 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 NPIPB5A8MRT5 1133 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 MORN3Q6PF18 240 aaPredicted RBP9.18□□□□□ -0.94
FN1-211ENST00000443816 SELLP14151 372 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 RNASE7Q9H1E1 156 aaKnown RBP9.18□□□□□ -0.94
FN1-211ENST00000443816 PRR14LQ5THK1 2151 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 IFITM3Q01628 133 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 A0A087WWC5 75 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 LY6HO94772 140 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 PRDM13Q9H4Q3 707 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 PYYP10082 97 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 TDGF1P3P51864 188 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 PNRC2Q9NPJ4 139 aaKnown RBP9.18□□□□□ -0.94
FN1-211ENST00000443816 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
FN1-211ENST00000443816 IGKV2-40A0A087WW87 121 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms