RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 IGLL5B9A064 214 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 MGST3O14880 152 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 NDUFS7O75251 213 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 LINC00305Q7Z4B0 112 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 PPDPFLQ8WWR9 84 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 TMEM190Q8WZ59 177 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 CALYQ9NYX4 217 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 IGHV3-48P01763 117 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 FOXI2Q6ZQN5 318 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 TMEM160Q9NX00 188 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 PRR33A8MZF0 331 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 TTC32Q5I0X7 151 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 LEAP2Q969E1 77 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 ACP1P24666 158 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 TCTEX1D4Q5JR98 221 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 KLF13Q9Y2Y9 288 aaPredicted RBP4.09□□□□□ -1.75
HERC1-201ENST00000443617 A0A1W2PR77 199 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 OR11H12B2RN74 326 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 LYZP61626 148 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 RRN3P1Q2M238 152 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 GGNQ86UU5 652 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 C17orf82Q86X59 251 aaPredicted RBP4.09□□□□□ -1.75
HERC1-201ENST00000443617 OR11H1Q8NG94 326 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 OR11H2Q8NH07 326 aa4.09□□□□□ -1.75
HERC1-201ENST00000443617 SPAARA0A1B0GVQ0 90 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 C15orf65H3BRN8 121 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 HBDP02042 147 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 ZNF418Q8TF45 676 aaPredicted RBP4.09□□□□□ -1.76
HERC1-201ENST00000443617 H3BVH4 76 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 CYSLTR1Q9Y271 337 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 IL4P05112 153 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 ARPC1AQ92747 370 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 WDR90Q96KV7 1748 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 PIEZO1Q92508 2521 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 IGHV1-45A0A0A0MS14 117 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 HOXA3O43365 443 aaPredicted RBP4.09□□□□□ -1.76
HERC1-201ENST00000443617 COX6A1P12074 109 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 EIF4EBP1Q13541 118 aaPredicted RBP4.09□□□□□ -1.76
HERC1-201ENST00000443617 CHAC1Q9BUX1 264 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 Q9H3A6 140 aa4.09□□□□□ -1.76
HERC1-201ENST00000443617 CFHR2P36980 270 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 FER1L6-AS2Q96M78 137 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 LOXL2Q9Y4K0 774 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 LOC107984156A0A0G2JMH3 177 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 LTAP01374 205 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ARL17AQ8IVW1 177 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 SMPXQ9UHP9 88 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 TMEM262E9PQX1 116 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 MYOZ3Q8TDC0 251 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 SS18L2Q9UHA2 77 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 TRGV8A0A0C4DH27 118 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 FGF6P10767 208 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 PPP1R32Q7Z5V6 425 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ZNF503Q96F45 646 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 LINC01565O15544 149 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ALKBH6Q3KRA9 238 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 Q6AWC8 147 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 AMTNQ6UX39 209 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 FOXC2Q99958 501 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ATP5LO75964 103 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 PRCDQ00LT1 54 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 CNEP1R1Q8N9A8 125 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 NPIPB6E9PJ23 425 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 KLF14Q8TD94 323 aaPredicted RBP4.08□□□□□ -1.76
HERC1-201ENST00000443617 DKK1O94907 266 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 COL8A2P25067 703 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 PRR7Q8TB68 274 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE12JA6NER3 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE7O76087 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 TFF1P04155 84 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE12FP0CL80 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE12GP0CL81 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE12IP0CL82 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 GAGE4Q13068 117 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 C12orf74Q32Q52 190 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 HCP5Q6MZN7 132 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 C6orf15Q6UXA7 325 aaPredicted RBP4.08□□□□□ -1.76
HERC1-201ENST00000443617 FAM222BQ8WU58 562 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 NCOR2Q9Y618 2525 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 HIGD1BQ9P298 99 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 SPTBN4Q9H254 2564 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 D6R8Y8 96 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 C3AR1Q16581 482 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 ERG28Q9UKR5 140 aa4.08□□□□□ -1.76
HERC1-201ENST00000443617 E9PLD3 99 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 SNCGO76070 127 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 CLEC3BP05452 202 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 VMA21Q3ZAQ7 101 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 GUSBP11Q6P575 273 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 FAM169BQ8N8A8 192 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 DLX4Q92988 240 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 PRSS22Q9GZN4 317 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 PROK2Q9HC23 129 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms