RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 KALRNO60229 2985 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 IGHV1-69-2A0A0G2JMI3 117 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 A8MWL6 223 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 M0R2Z0 102 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 IGLC2P0DOY2 106 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 IGLC3P0DOY3 106 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 GP9P14770 177 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 CNTFRP26992 372 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 SMIM15Q7Z3B0 74 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 TXN2Q99757 166 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 CLEC7AQ9BXN2 247 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 IGHV2-26A0A0B4J1V2 119 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 HBBP68871 147 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 PMCHL1Q16048 86 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 Q9H3A6 140 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 AKAP13Q12802 2813 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 E7EQL1 145 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 P01737 135 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 CRYGBP07316 175 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 PLP1P60201 277 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 RNASEKQ6P5S7 137 aaKnown RBP13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 SHISA9B4DS77 424 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 LTAP01374 205 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 TCRAP04437 139 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 CT83Q5H943 113 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 PRSS22Q9GZN4 317 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 F11RQ9Y624 299 aaKnown RBP13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 COX11Q9Y6N1 276 aa13.18□□□□□ -0.3
SEMA3B-207ENST00000441915 GVINP1Q7Z2Y8 2422 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 RIF1Q5UIP0 2472 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 ZNF292O60281 2723 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 IGLV1-47P01700 117 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 HNRNPA3P51991 378 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 LINC00322Q6ZN03 302 aaPredicted RBP13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 Q6ZN92 141 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 RALYQ9UKM9 306 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 MALRD1Q5VYJ5 2156 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 H3BTX0 84 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 PAX2Q02962 417 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 ZNF835Q9Y2P0 537 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 ABCA1O95477 2261 aa13.17□□□□□ -0.3
SEMA3B-207ENST00000441915 TMEM11P17152 192 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 DLX1P56177 255 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 ATOH7Q8N100 152 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 SOX21Q9Y651 276 aaPredicted RBP13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 C19orf71A6NCJ1 209 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 CBY3A6NI87 242 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
SEMA3B-207ENST00000441915 BUB1B-PAK6H3BSN5 160 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 LYZP61626 148 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 Q6ZVH6 145 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 GTSF1Q8WW33 167 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 IGHV2-70DA0A0C4DH43 119 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 TEX22C9J3V5 150 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 PSG1P11464 419 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 PRB3Q04118 309 aaPredicted RBP13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 OR8B3Q8NGG8 313 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 OR8B2Q96RD0 313 aa13.15□□□□□ -0.3
SEMA3B-207ENST00000441915 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 Q8NA96 180 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 GFRA4Q9GZZ7 299 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 POLEQ07864 2286 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 IGLC1P0CG04 106 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 Q56UQ5 140 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 SRSF12Q8WXF0 261 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 PGLYRP4Q96LB8 373 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 FBXL15Q9H469 300 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 PIEZO2Q9H5I5 2752 aa13.14□□□□□ -0.31
SEMA3B-207ENST00000441915 B9A039 149 aa13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 RBPMS2Q6ZRY4 209 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 RPEQ96AT9 228 aa13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 RASL11BQ9BPW5 248 aa13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 SLC25A39Q9BZJ4 359 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 CHTOPQ9Y3Y2 248 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 COL8A1P27658 744 aa13.13□□□□□ -0.31
SEMA3B-207ENST00000441915 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 TPRP12270 2363 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms