RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RANP62826 216 aaKnown RBP4.72□□□□□ -1.65
VPS50-205ENST00000441602 PDE6HQ13956 83 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 ZNF329Q86UD4 541 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 OR8I2Q8N0Y5 310 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 FAM24BQ8N5W8 94 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 SMIM12Q96EX1 92 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 ZNF503Q96F45 646 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 IMMP2LQ96T52 175 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 FOXC2Q99958 501 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 VPREB3Q9UKI3 123 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 S4R3C0 116 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 TRAV9-1A0A075B6T8 112 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 COLCA2A8K830 154 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 GP9P14770 177 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 RPS10P46783 165 aaKnown RBP4.71□□□□□ -1.65
VPS50-205ENST00000441602 FBLN7Q53RD9 439 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 CENPWQ5EE01 88 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 LINC01551Q86U37 167 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 TMEM86BQ8N661 226 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 ISOC2Q96AB3 205 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 ATG101Q9BSB4 218 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 ELOVL1Q9BW60 279 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 Q9H3A6 140 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 CDC42EP3Q9UKI2 254 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 FAM208BQ5VWN6 2430 aa4.71□□□□□ -1.65
VPS50-205ENST00000441602 DMXL2Q8TDJ6 3036 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 SH2D7A6NKC9 451 aaPredicted RBP4.71□□□□□ -1.66
VPS50-205ENST00000441602 GGTLC3B5MD39 225 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 FSHBP01225 129 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 IGHV3-23P01764 117 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 CLEC3BP05452 202 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 MGST1P10620 155 aaKnown RBP4.71□□□□□ -1.66
VPS50-205ENST00000441602 ARL3P36405 182 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 COX19Q49B96 90 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 FMC1Q96HJ9 113 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 FAM210BQ96KR6 192 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 CLEC5AQ9NY25 188 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 RPH3ALQ9UNE2 315 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 A0A1W2PS18 150 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 ZNF785A8K8V0 405 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 PPP5D1E7EU14 171 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 AVPP01185 164 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 CTSGP08311 255 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 NPPCP23582 126 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 IER3P46695 156 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 MORN5Q5VZ52 161 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 ARL6IP6Q8N6S5 226 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 MAPK1IP1LQ8NDC0 245 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 C2CD4CQ8TF44 421 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 SFRP2Q96HF1 295 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 OSTCQ9NRP0 149 aa4.71□□□□□ -1.66
VPS50-205ENST00000441602 FRYQ5TBA9 3013 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 ZNF253O75346 499 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 IGHV4-59P01825 116 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 CRYBA1P05813 215 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 ERVFC1-1P60608 527 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 Q6YL49 198 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 DAZAP1Q96EP5 407 aaKnown RBP4.7□□□□□ -1.66
VPS50-205ENST00000441602 SLC50A1Q9BRV3 221 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 URGCP-MRPS24S4R325 110 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 TRBV24-1A0A075B6N3 115 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 GATCO43716 136 aaKnown RBP4.7□□□□□ -1.66
VPS50-205ENST00000441602 TOMM20LQ6UXN7 152 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 OCC1Q8TAD7 63 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 MED13LQ71F56 2210 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 TRBV19A0A075B6N1 114 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 NDUFA4O00483 81 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 SMAD7O15105 426 aaKnown RBP4.7□□□□□ -1.66
VPS50-205ENST00000441602 AMY1AP04745 511 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 USF2Q15853 346 aaPredicted RBP4.7□□□□□ -1.66
VPS50-205ENST00000441602 RPEL1Q2QD12 228 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 C19orf54Q5BKX5 351 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 LEMD1Q68G75 181 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 SERTAD4Q9NUC0 356 aa4.7□□□□□ -1.66
VPS50-205ENST00000441602 IGSF10Q6WRI0 2623 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 TRBV6-1A0A0K0K1D8 114 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 GGCTO75223 188 aaKnown RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 TCRAP04437 139 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 ELANEP08246 267 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 ELOBQ15370 118 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 SAMD13Q5VXD3 122 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 C1QL4Q86Z23 238 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 IL36BQ9NZH7 164 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 NAV3Q8IVL0 2385 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 ISLRO14498 428 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 GCGP01275 180 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 ZNF343Q6P1L6 599 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 BCL6BQ8N143 479 aaPredicted RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 PRDM13Q9H4Q3 707 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 SRD5A3Q9H8P0 318 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms