RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 A0A1W2PPM0 123 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 TCRBV4S1A1TA0A5B7 111 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 TIMM17BO60830 172 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 GADD45GO95257 159 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 DNAL4O96015 105 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 ZNF25P17030 456 aaPredicted RBP0.64□□□□□ -2.31
VPS8-208ENST00000441141 RNASE4P34096 147 aaKnown RBP0.64□□□□□ -2.31
VPS8-208ENST00000441141 ATP5G3P48201 142 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 PIGPP57054 158 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 DYNLT1P63172 113 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 MRPS15P82914 257 aaKnown RBP0.64□□□□□ -2.31
VPS8-208ENST00000441141 GOLT1AQ6ZVE7 132 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 GKN2Q86XP6 184 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 PATE1Q8WXA2 126 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 TP53RKQ96S44 253 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 IMUPQ9GZP8 106 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 OPTCQ9UBM4 332 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 PCF11O94913 1555 aaKnown RBP0.64□□□□□ -2.31
VPS8-208ENST00000441141 MCM3APO60318 1980 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 SCN8AQ9UQD0 1980 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 SNRNP200O75643 2136 aaKnown RBP0.64□□□□□ -2.31
VPS8-208ENST00000441141 RIMBP3CA6NJZ7 1639 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 RIMBP3BA6NNM3 1639 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 RIMBP3Q9UFD9 1639 aa0.64□□□□□ -2.31
VPS8-208ENST00000441141 TRBV19A0A075B6N1 114 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 IGLV3-32A0A0A0MS00 114 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 TRBV6-4A0A1B0GX49 114 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 A8MWV9 139 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 CCL16O15467 120 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 IFNA7P01567 189 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 HSPE1P61604 102 aaKnown RBP0.63□□□□□ -2.31
VPS8-208ENST00000441141 PSG9Q00887 426 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 TAF1AQ15573 450 aaPredicted RBP0.63□□□□□ -2.31
VPS8-208ENST00000441141 RRN3P1Q2M238 152 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 C22orf39Q6P5X5 142 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 LINC00322Q6ZN03 302 aaPredicted RBP0.63□□□□□ -2.31
VPS8-208ENST00000441141 Q8IYB0 196 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 ZNF431Q8TF32 576 aaPredicted RBP0.63□□□□□ -2.31
VPS8-208ENST00000441141 CANT1Q8WVQ1 401 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 PHB2Q99623 299 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 TMEM70Q9BUB7 260 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 ARMC1Q9NVT9 282 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 ORMDL1Q9P0S3 153 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 LY96Q9Y6Y9 160 aa0.63□□□□□ -2.31
VPS8-208ENST00000441141 ARHGEF28Q8N1W1 1705 aaKnown RBP0.63□□□□□ -2.31
VPS8-208ENST00000441141 HMGB3O15347 200 aaKnown RBP0.62□□□□□ -2.31
VPS8-208ENST00000441141 CCL25O15444 150 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 GGCTO75223 188 aaKnown RBP0.62□□□□□ -2.31
VPS8-208ENST00000441141 C1QBP02746 253 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 TMED2Q15363 201 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 C4orf22Q6V702 233 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 PDZD9Q8IXQ8 264 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 PLPP5Q8NEB5 264 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 TMEM126AQ9H061 195 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 ARL5AQ9Y689 179 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 KIAA1549Q9HCM3 1950 aa0.62□□□□□ -2.31
VPS8-208ENST00000441141 M0R378 163 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 TAX1BP3O14907 124 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 NDUFB3O43676 98 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 NUPR1O60356 82 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 HACD4Q5VWC8 232 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 EXOC3-AS1Q8N2X6 119 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 PXT1Q8NFP0 134 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 CEP19Q96LK0 163 aa0.61□□□□□ -2.31
VPS8-208ENST00000441141 SLC25A21Q9BQT8 299 aaPredicted RBP0.61□□□□□ -2.31
VPS8-208ENST00000441141 CNTRLQ7Z7A1 2325 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 IGHV1-58A0A0C4DH39 117 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 CST8O60676 142 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 NCALDP61601 193 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 ARF6P62330 175 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 BASP1P80723 227 aaKnown RBP0.6□□□□□ -2.31
VPS8-208ENST00000441141 DHRS4L2Q6PKH6 230 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 TEN1Q86WV5 123 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 Q8N6K4 173 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 OR5D14Q8NGL3 314 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 PSTPIP2Q9H939 334 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 MED29Q9NX70 200 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 TNFSF18Q9UNG2 199 aa0.6□□□□□ -2.31
VPS8-208ENST00000441141 CHCHD2Q9Y6H1 151 aaPredicted RBP0.6□□□□□ -2.31
VPS8-208ENST00000441141 DOCK4Q8N1I0 1966 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 E9PCH4 1651 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 MED12Q93074 2177 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 TLCD2A6NGC4 264 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 C17orf112F2Z3M2 114 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 UBE2BP63146 152 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 GNG5P63218 68 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 EIF5AL1Q6IS14 154 aaKnown RBP0.59□□□□□ -2.31
VPS8-208ENST00000441141 SBSPONQ8IVN8 264 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 OR10K1Q8NGX5 313 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 CDC26Q8NHZ8 85 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 LINC00052Q96N35 136 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 PRNDQ9UKY0 176 aa0.59□□□□□ -2.31
VPS8-208ENST00000441141 CAMSAP1Q5T5Y3 1602 aa0.59□□□□□ -2.32
VPS8-208ENST00000441141 MIA2Q96PC5 1412 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 CASP8AP2Q9UKL3 1982 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 TRAV10A0A0B4J240 114 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 OR2T8A6NH00 312 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 B4DSR2 109 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 H3BRM9 83 aa0.58□□□□□ -2.32
VPS8-208ENST00000441141 TMEM256-PLSCR3K7ERE1 68 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms