RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 C7orf66A4D0T2 115 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 TSC22D2O75157 780 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 TAS2R30P59541 319 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
LTBR-202ENST00000440421 DLK1P80370 383 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 C1orf194Q5T5A4 169 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 OR8I2Q8N0Y5 310 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 RARRES2Q99969 163 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 SLC25A22Q9H936 323 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 DOK5Q9P104 306 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 MGAT4CQ9UBM8 478 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 DNAH7Q8WXX0 4024 aa10.06□□□□□ -0.8
LTBR-202ENST00000440421 AGRNO00468 2067 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 K7EPK0 472 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 IL5P05113 134 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 BCAP31P51572 246 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 ARL16Q0P5N6 197 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 PMS2P11Q13670 270 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 C2orf50Q96LR7 162 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 LINC00052Q96N35 136 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
LTBR-202ENST00000440421 C4BPBP20851 252 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 DEFB1P60022 68 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 S100A10P60903 97 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 MORN3Q6PF18 240 aaPredicted RBP10.04□□□□□ -0.8
LTBR-202ENST00000440421 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 NPVFQ9HCQ7 196 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 SEPSECSQ9HD40 501 aaKnown RBP10.04□□□□□ -0.8
LTBR-202ENST00000440421 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
LTBR-202ENST00000440421 CXorf65A6NEN9 183 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 ZNF98A6NK75 572 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
LTBR-202ENST00000440421 OR5G3P0C626 314 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 LINC00869P0C866 280 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 SPP1P10451 314 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 ID1P41134 155 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 CAV2P51636 162 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
LTBR-202ENST00000440421 CLEC5AQ9NY25 188 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
LTBR-202ENST00000440421 LCE6AA0A183 80 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 FAM24AA6NFZ4 105 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 FNDC10F2Z333 226 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 SOCS3O14543 225 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 DEFB4AO15263 64 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 HYPMO75409 117 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 CST7O76096 145 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 PVALBP20472 110 aaPredicted RBP10.02□□□□□ -0.81
LTBR-202ENST00000440421 GALR1P47211 349 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 PSMB3P49720 205 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 RAP2BP61225 183 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 RAB32Q13637 225 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 TEPPQ6URK8 271 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 TMEM217Q8N7C4 229 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 RSG1Q9BU20 258 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 C11orf1Q9H5F2 150 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 HIGD1AQ9Y241 93 aa10.02□□□□□ -0.81
LTBR-202ENST00000440421 H3BMM0 161 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 H3BRN7 92 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 DEDDO75618 318 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 SIX6O95475 246 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 S100A7P31151 101 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 SELENOTP62341 195 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 UHRF2Q96PU4 802 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 GGACTQ9BVM4 153 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
LTBR-202ENST00000440421 ARL6Q9H0F7 186 aa10.01□□□□□ -0.81
LTBR-202ENST00000440421 TENM2Q9NT68 2774 aa10□□□□□ -0.81
LTBR-202ENST00000440421 INMT-MINDY4F8WBC2 141 aa10□□□□□ -0.81
LTBR-202ENST00000440421 ISLRO14498 428 aa10□□□□□ -0.81
LTBR-202ENST00000440421 GOSR2O14653 212 aa10□□□□□ -0.81
LTBR-202ENST00000440421 AGPAT2O15120 278 aa10□□□□□ -0.81
LTBR-202ENST00000440421 HLA-DRB4P13762 266 aa10□□□□□ -0.81
LTBR-202ENST00000440421 MEOX2P50222 304 aa10□□□□□ -0.81
LTBR-202ENST00000440421 DEFA1P59665 94 aa10□□□□□ -0.81
LTBR-202ENST00000440421 DEFA3P59666 94 aa10□□□□□ -0.81
LTBR-202ENST00000440421 FGL1Q08830 312 aa10□□□□□ -0.81
LTBR-202ENST00000440421 IL15RAQ13261 267 aa10□□□□□ -0.81
LTBR-202ENST00000440421 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
LTBR-202ENST00000440421 ZNF546Q86UE3 836 aa10□□□□□ -0.81
LTBR-202ENST00000440421 C16orf92Q96LL3 132 aa10□□□□□ -0.81
LTBR-202ENST00000440421 C17orf77Q96MU5 243 aa10□□□□□ -0.81
LTBR-202ENST00000440421 GPR82Q96P67 336 aa10□□□□□ -0.81
LTBR-202ENST00000440421 SHANK2-AS3Q9BTD1 123 aa10□□□□□ -0.81
LTBR-202ENST00000440421 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
LTBR-202ENST00000440421 IGSF23A1L1A6 192 aa9.99□□□□□ -0.81
LTBR-202ENST00000440421 F6UB75 175 aa9.99□□□□□ -0.81
LTBR-202ENST00000440421 PRAF2O60831 178 aa9.99□□□□□ -0.81
LTBR-202ENST00000440421 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
LTBR-202ENST00000440421 FXYD7P58549 80 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms