RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZNF124Q15973 351 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 Q56UQ5 140 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 Q9H3A6 140 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 HIST1H1EP10412 219 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 CIARTQ8N365 385 aaPredicted RBP10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 C22orf15Q8WYQ4 148 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 GPR82Q96P67 336 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 RALYQ9UKM9 306 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 IGF2RP11717 2491 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 M0R2Z0 102 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 C17orf77Q96MU5 243 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 PRRX1P54821 245 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 TXN2Q99757 166 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 HILPDAQ9Y5L2 63 aa10.8□□□□□ -0.68
HERPUD1-204ENST00000439977 FAM90A27PA6NNH2 459 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 BUB1B-PAK6H3BSN5 160 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 CNIH1O95406 144 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 GP9P14770 177 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 ETFRF1Q6IPR1 90 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 FAM231DQ6ZW35 169 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 ZNF596Q8TC21 504 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 RPEQ96AT9 228 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 TP73-AS1Q9UF72 201 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 PTPRQQ9UMZ3 2332 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 IGLV1-47P01700 117 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 CRYGCP07315 174 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 ZNF138P52744 262 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 COX19Q49B96 90 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 LDLRAD2Q5SZI1 272 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 Q6ZN92 141 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 PRNTQ86SH4 94 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 TMEM116Q8NCL8 245 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 SRSF12Q8WXF0 261 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 JKAMPQ9P055 326 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
HERPUD1-204ENST00000439977 PPIAL4CA0A0B4J2A2 164 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 P01737 135 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 TCRAP04437 139 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 PPIAL4GP0DN37 164 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 GOLT1AQ6ZVE7 132 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 TEX45Q8NA69 505 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 NPSP0C0P6 89 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 FAM71F2Q6NXP2 309 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 SSX8Q7RTT4 187 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 C8orf46Q8TAG6 207 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 TRGV9Q99603 122 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 RPP21Q9H633 154 aaKnown RBP10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 CTRLP40313 264 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 STXBP6Q8NFX7 210 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 DAZAP1Q96EP5 407 aaKnown RBP10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 HIGD1AQ9Y241 93 aa10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 F11RQ9Y624 299 aaKnown RBP10.78□□□□□ -0.68
HERPUD1-204ENST00000439977 AKAP6Q13023 2319 aa10.77□□□□□ -0.68
HERPUD1-204ENST00000439977 ARF6P62330 175 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 FOXC1Q12948 553 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 BCL6BQ8N143 479 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 WNK2Q9Y3S1 2297 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 CRYGBP07316 175 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 CD3EP07766 207 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 IGLC1P0CG04 106 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 C5orf17Q8NAS9 161 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 RASL11BQ9BPW5 248 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 SLC25A39Q9BZJ4 359 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 NGBQ9NPG2 151 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.69
HERPUD1-204ENST00000439977 H0Y8G0 127 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 TIMM23O14925 209 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 IGLC2P0DOY2 106 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 COL8A1P27658 744 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 FBLN7Q53RD9 439 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 Q6ZVH6 145 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 MUC15Q8N387 334 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 OR8B2Q96RD0 313 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 WIPF2Q8TF74 440 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 URB1-AS1Q96HZ7 61 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms