RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SAA1P0DJI8 122 aaPredicted RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 ATP5G3P48201 142 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 PRRX1P54821 245 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 RANP62826 216 aaKnown RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 IQCJQ1A5X6 159 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 RPEL1Q2QD12 228 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 OR10J3Q5JRS4 329 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 S100A7AQ86SG5 101 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 MMD2Q8IY49 270 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 ABHD12Q8N2K0 398 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 ARL6IP6Q8N6S5 226 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 OR10D4PQ8NGN7 298 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 EAF1Q96JC9 268 aaPredicted RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 TRGV9Q99603 122 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 SLC25A33Q9BSK2 321 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 TRAV3A0A0B4J244 114 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 PCP4L1A6NKN8 68 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 HILS1P60008 231 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 GAMTQ14353 236 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TIGITQ495A1 244 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 CT83Q5H943 113 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 LDLRAD2Q5SZI1 272 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 FAM162BQ5T6X4 162 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 GBGT1Q8N5D6 347 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 HARBI1Q96MB7 349 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 SIRPDQ9H106 197 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 PRDM13Q9H4Q3 707 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TRAPPC1Q9Y5R8 145 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 ANK2Q01484 3957 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 A0A1W2PPQ1 181 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 HELTA6NFD8 242 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 IGLV2-23P01705 113 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 AMBPP02760 352 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 CRYGBP07316 175 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 GATA3P23771 443 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 FBLN7Q53RD9 439 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 Q6ZS46 218 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 ATP5L2Q7Z4Y8 100 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 YTHDF2Q9Y5A9 579 aaKnown RBP3.77□□□□□ -1.81
EDEM3-203ENST00000439962 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 OOSP1A8MZH6 123 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 LINC00587B1AMM8 73 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 J3QLI3 93 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 HLA-DQA1P01909 254 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 RAB4AP20338 218 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 GNG4P50150 75 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 LINC00205P59089 165 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 RAB4BP61018 213 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 BLCAPP62952 87 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 CX3CL1P78423 397 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 FAM78BQ5VT40 261 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 REC114Q7Z4M0 266 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TGIF2LXQ8IUE1 241 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TMEM116Q8NCL8 245 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 SGMS2Q8NHU3 365 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 OCC1Q8TAD7 63 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
EDEM3-203ENST00000439962 IGF2BP2-AS1Q96M15 143 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 MRPL20Q9BYC9 149 aaKnown RBP3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 SEPSECSQ9HD40 501 aaKnown RBP3.77□□□□□ -1.81
EDEM3-203ENST00000439962 TMEM14CQ9P0S9 112 aa3.77□□□□□ -1.81
EDEM3-203ENST00000439962 ZMAT5Q9UDW3 170 aaKnown RBP3.77□□□□□ -1.81
EDEM3-203ENST00000439962 MEGF8Q7Z7M0 2845 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 SCO2A0A1W2PP80 73 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 SMIM27A0A1W2PRY6 76 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 ZNF320A2RRD8 509 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 FBLL1A6NHQ2 334 aaKnown RBP3.76□□□□□ -1.81
EDEM3-203ENST00000439962 NCBP2LA6PVI3 153 aaKnown RBP3.76□□□□□ -1.81
EDEM3-203ENST00000439962 PRB2P02812 416 aaPredicted RBP3.76□□□□□ -1.81
EDEM3-203ENST00000439962 IGHV1-8P0DP01 117 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 FABP4P15090 132 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 OR10J1P30954 320 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 S100A7P31151 101 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 MYCNOSP40205 109 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 TPPP2P59282 170 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 DEFA6Q01524 100 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 LCNL1Q6ZST4 164 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 ZNF329Q86UD4 541 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 FAM167A-AS1Q96KT0 104 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 ZNF492Q9P255 531 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 KLF12Q9Y4X4 402 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 V9GYV3 84 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 TNCP24821 2201 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 IGHV2-26A0A0B4J1V2 119 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
EDEM3-203ENST00000439962 IGLV1-47P01700 117 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 APELAP0DMC3 54 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 GZMBP10144 247 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 ZNF90Q03938 601 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 PSG5Q15238 335 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 NSUN5P1Q3KNT7 163 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 SPINK9Q5DT21 86 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 C10orf113Q5VZT2 155 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 MOB3BQ86TA1 216 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 VKORC1L1Q8N0U8 176 aa3.76□□□□□ -1.81
EDEM3-203ENST00000439962 LYPD1Q8N2G4 141 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms