RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 UQCRFS1P47985 274 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 RPL15P61313 204 aaKnown RBP9.98□□□□□ -0.81
TCOF1-205ENST00000439160 SPRNQ5BIV9 151 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 LYPD6Q86Y78 171 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 CDC42EP3Q9UKI2 254 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 CNTFRP26992 372 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 TSPOP30536 169 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 HINT1P49773 126 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-205ENST00000439160 Q8NFD4 153 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 SSC4DQ8WTU2 575 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 WNK1Q9H4A3 2382 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 NDUFS7O75251 213 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 TEX38Q6PEX7 206 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 PF4P02776 101 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 NMUP48645 174 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 CIARTQ8N365 385 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-205ENST00000439160 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 TRBV20OR9-2A0A075B6H5 130 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 SRD5A1P18405 259 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 PAX8Q06710 450 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 C1QL4Q86Z23 238 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 PYY3Q5JQD4 70 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 SEM1Q6ZVN7 128 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 ZNF329Q86UD4 541 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 TMEM131Q92545 1883 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 DSCR9P59020 149 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 DIAPH2-AS1Q14236 149 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 ZNF418Q8TF45 676 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-205ENST00000439160 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-205ENST00000439160 PSG8Q9UQ74 426 aa9.97□□□□□ -0.81
TCOF1-205ENST00000439160 A6NNC1 897 aa9.96□□□□□ -0.81
TCOF1-205ENST00000439160 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-205ENST00000439160 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.81
TCOF1-205ENST00000439160 ITLN2Q8WWU7 325 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-205ENST00000439160 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 NUDT3O95989 172 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 VDAC2P45880 294 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-205ENST00000439160 RRN3P1Q2M238 152 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 ZNF502Q8TBZ5 544 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 TMEM14BQ9NUH8 114 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 NDUFS6O75380 124 aaKnown RBP9.95□□□□□ -0.82
TCOF1-205ENST00000439160 SP5Q6BEB4 398 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-205ENST00000439160 TRGV9Q99603 122 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 SHISA9B4DS77 424 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 FOLR2P14207 255 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
TCOF1-205ENST00000439160 ZNF56Q15929 161 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 FAM71F2Q6NXP2 309 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 SPSB3Q6PJ21 355 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 LINC01551Q86U37 167 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 FAM19A2Q8N3H0 131 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 HIST1H2BLQ99880 126 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
TCOF1-205ENST00000439160 CTAG1AP78358 180 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 KRTAP27-1Q3LI81 207 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 FER1L6-AS1Q8NA97 138 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 BEND2Q8NDZ0 799 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 OR4C46A6NHA9 309 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 SCGB1C2P0DMR2 95 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 CD33P20138 364 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 HERVK_113P61574 105 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 SLC50A1Q9BRV3 221 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
TCOF1-205ENST00000439160 NCOR1P1Q9H4R4 102 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 HIVEP3Q5T1R4 2406 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 NDPQ00604 133 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 TPSG1Q9NRR2 321 aa9.94□□□□□ -0.82
TCOF1-205ENST00000439160 EML6Q6ZMW3 1958 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 NPIPB5A8MRT5 1133 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
TCOF1-205ENST00000439160 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 TBL2Q9Y4P3 447 aaKnown RBP9.93□□□□□ -0.82
TCOF1-205ENST00000439160 TNCP24821 2201 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 ASIPP42127 132 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 Q6ZSR3 168 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 ZNF833PQ6ZTB9 187 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms