RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 OTORQ9NRC9 128 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 BET1LQ9NYM9 111 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 CCDC167Q9P0B6 97 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 NOP16Q9Y3C1 178 aaKnown RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 RTEL1-TNFRSF6BF6WH68 1400 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ATRNO75882 1429 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 CASKIN1Q8WXD9 1431 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 DIP2BQ9P265 1576 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 FER1L6Q2WGJ9 1857 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ANKRD31Q8N7Z5 1873 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 DSPPQ9NZW4 1301 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 PLEKHH2Q8IVE3 1493 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 RIMBP3CA6NJZ7 1639 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 RIMBP3BA6NNM3 1639 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 CC2D2AQ9P2K1 1620 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 RIMBP3Q9UFD9 1639 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 LAMB4A4D0S4 1761 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 MYH7BA7E2Y1 1941 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 MYH1P12882 1939 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 KIF13AQ9H1H9 1805 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 UGGT2Q9NYU1 1516 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SPHKAPQ2M3C7 1700 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 TRPM3Q9HCF6 1732 aaPredicted RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 ABCC5O15440 1437 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IGLV3-12A0A075B6K2 115 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A087X0T9 212 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 TRGV10A0A0A0MS01 117 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IGHV1-45A0A0A0MS14 117 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IZUMO1RA6ND01 250 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 ARRDC5A6NEK1 342 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 K7ERS5 55 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 RER1O15258 196 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 LYZL6O75951 148 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 APOMO95445 188 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 KRASP01116 189 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IGLV3-19P01714 112 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 TRGC2P03986 189 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 NMBP08949 121 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SEC11BP0C7V7 166 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SMIM10L2AP0DMW4 78 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SMIM10L2BP0DMW5 78 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IFITM1P13164 125 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 CRYGSP22914 178 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 PSMB8P28062 276 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 OPRM1P35372 400 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 INSL3P51460 131 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 AQP4P55087 323 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 HERVK_113P63121 156 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 DIAPH2-AS1Q14236 149 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 MSMO1Q15800 293 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 RTL8BQ17RB0 113 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 RNASE13Q5GAN3 156 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 C10orf91Q5T1B1 145 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPL2Q5T653 305 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPL54Q6P161 138 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 UNQ5815/PRO19632Q6UWF5 114 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 RPS19BP1Q86WX3 136 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 C3orf22Q8N5N4 141 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 ZFP62Q8NB50 900 aaPredicted RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 OR4K13Q8NH42 304 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 OR5AK2Q8NH90 309 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SGMS2Q8NHU3 365 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 BRK1Q8WUW1 75 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 RTN4IP1Q8WWV3 396 aaPredicted RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 TM2D3Q9BRN9 247 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 SPANXDQ9BXN6 97 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IMUPQ9GZP8 106 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 AICDAQ9GZX7 198 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 DUSP21Q9H596 190 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 FBXL12Q9NXK8 326 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 FKBP11Q9NYL4 201 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 MPC1Q9Y5U8 109 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A1B0GUL6 1792 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 TARBP1Q13395 1621 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 AHDC1Q5TGY3 1603 aaPredicted RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 IQGAP3Q86VI3 1631 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 PXDNLA1KZ92 1463 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 PPRC1Q5VV67 1664 aaKnown RBP2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 ABCC2Q92887 1545 aa2.12□□□□□ -2.07
LSM1P1-201ENST00000438629 CABIN1Q9Y6J0 2220 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MYO5CQ9NQX4 1742 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 DOCK9Q9BZ29 2069 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 DIP2AQ14689 1571 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 PPLO60437 1756 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 KDM6AO15550 1401 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TRAV27A0A087WT01 109 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TRAV41A0A0B4J266 112 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A0D9SG52 128 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TLCD2A6NGC4 264 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 OR2T8A6NH00 312 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 C4orf51C9J302 202 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 H3BQ15 152 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 M0R129 80 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 M0R381 172 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 LST1O00453 97 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 KLF7O75840 302 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 HLA-DQB1P01920 261 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MT-ND6P03923 174 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms