RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LSM4Q9Y4Z0 139 aaKnown RBP5.43□□□□□ -1.54
CSDE1-205ENST00000438362 EML5Q05BV3 1969 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 TRAV8-1A0A0A6YYK1 113 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 K7EN84 100 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 M0QZ24 198 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3-23P01764 117 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 DUX4L9Q6RFH8 374 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-205ENST00000438362 UNQ6494/PRO21346Q6UXR6 183 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 UBTD1Q9HAC8 227 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 TNCP24821 2201 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 CACNA1BQ00975 2339 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 EML6Q6ZMW3 1958 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3OR16-13A0A075B7E8 117 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV2-26A0A0B4J1V2 119 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3-74A0A0B4J1X5 117 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 A0A1W2PPI3 338 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 LYNX1G3V0Z9 82 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF207O43670 478 aaKnown RBP5.42□□□□□ -1.54
CSDE1-205ENST00000438362 LYNX1P0DP58 116 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 DLX6P56179 175 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 TEX43Q6ZNM6 134 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF295-AS1Q8N0V1 137 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 ARPC1AQ92747 370 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 MS4A6AQ9H2W1 248 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 ZGRF1Q86YA3 2104 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3OR16-8A0A075B7F1 116 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-205ENST00000438362 A0A1B0GWJ7 208 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 TIMM23O14925 209 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 TOMM40O96008 361 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGLC2P0DOY2 106 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGLC3P0DOY3 106 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 HIST1H1AQ02539 215 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-205ENST00000438362 Q1RN00 199 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 FAM71F2Q6NXP2 309 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 FAM231DQ6ZW35 169 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 NUP37Q8NFH4 326 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 MMP23AO75900 390 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 SLAQ13239 276 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 ADIPOQQ15848 244 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 PSMG4Q5JS54 123 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 OR10J6PQ8NGY7 276 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 TMEM190Q8WZ59 177 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 SMIM12Q96EX1 92 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 YPEL4Q96NS1 127 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 DCAF16Q9NXF7 216 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 SIGLEC9Q9Y336 463 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 MRPS16Q9Y3D3 137 aaKnown RBP5.42□□□□□ -1.54
CSDE1-205ENST00000438362 PTPRSQ13332 1948 aa5.42□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV1-3A0A0C4DH29 117 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 SMIM27A0A1W2PRY6 76 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 hDV102S1A0JD36 115 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 HBDP02042 147 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 CD24P25063 80 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 WFDC3Q8IUB2 231 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 NUP210LQ5VU65 1888 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 SRRM4A7MD48 611 aaKnown RBP5.41□□□□□ -1.54
CSDE1-205ENST00000438362 FABP5P3A8MUU1 101 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 NUPR1O60356 82 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 MPV17L2Q567V2 206 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 LYPD2Q6UXB3 125 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 Q6ZS92 163 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 ORAOV1Q8WV07 137 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 C5orf30Q96GV9 206 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 SLC25A2Q9BXI2 301 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 IGLV3-9A0A075B6K5 115 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 F2Z2F3 143 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 SMIM13P0DJ93 91 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF138P52744 262 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 CACNG7P62955 275 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 WT1-ASQ06250 92 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 KHDC1LQ5JSQ8 128 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF833PQ6ZTB9 187 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF502Q8TBZ5 544 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 TMEM160Q9NX00 188 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 PHLDA3Q9Y5J5 127 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3-49A0A0A0MS15 119 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 ATP5LO75964 103 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 PRB4P10163 310 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-205ENST00000438362 UBE2V1Q13404 147 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 TPTE2P1Q5T6R2 138 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 SPACA3Q8IXA5 215 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 Q8TCH9 128 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 KLK15Q9H2R5 256 aa5.41□□□□□ -1.54
CSDE1-205ENST00000438362 TRAV8-6A0A0B4J262 113 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 TM4SF20Q53R12 229 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 CT83Q5H943 113 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 Q86TA4 180 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 RPRMLQ8N4K4 120 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 KIR3DL3Q8N743 410 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 EEF1AKMT3Q96AZ1 226 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 IFI27L1Q96BM0 104 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 RCHY1Q96PM5 261 aa5.4□□□□□ -1.54
CSDE1-205ENST00000438362 RNF5Q99942 180 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms