RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 RANP62826 216 aaKnown RBP5.93□□□□□ -1.46
COL17A1-204ENST00000433822 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF90Q03938 601 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 IQCJQ1A5X6 159 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 TMEM183BQ1AE95 376 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 LBHQ53QV2 105 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-204ENST00000433822 CT83Q5H943 113 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 OR10J3Q5JRS4 329 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 C11orf71Q6IPW1 123 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 S100A7AQ86SG5 101 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 DTX2Q86UW9 622 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 NPBQ8NG41 125 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 OR5AU1Q8NGC0 362 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 NPIPB3Q92617 1050 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 FXYD5Q96DB9 178 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 MBD6Q96DN6 1003 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 TIMD4Q96H15 378 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 NOL4LQ96MY1 436 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-204ENST00000433822 PAXXQ9BUH6 204 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 CBLN4Q9NTU7 201 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 TMEM14CQ9P0S9 112 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 INSIG2Q9Y5U4 225 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 PPIAL4CA0A0B4J2A2 164 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 FAM231BA6NCW3 169 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 PEX7O00628 323 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 REG1AP05451 166 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 PPIAL4GP0DN37 164 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 GZMBP10144 247 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 SFTPCP11686 197 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 REG1BP48304 166 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 ERVFC1-1P60608 527 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 SUMO1P63165 101 aaKnown RBP5.92□□□□□ -1.46
COL17A1-204ENST00000433822 PRR30Q53SZ7 412 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-204ENST00000433822 PATE2Q6UY27 113 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 REC114Q7Z4M0 266 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 ATP5L2Q7Z4Y8 100 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 MOB3BQ86TA1 216 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 ARL6IP6Q8N6S5 226 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 IGFBPL1Q8WX77 278 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 RPEQ96AT9 228 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 TNFRSF19Q9NS68 423 aa5.92□□□□□ -1.46
COL17A1-204ENST00000433822 SOX21Q9Y651 276 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-204ENST00000433822 MALRD1Q5VYJ5 2156 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 TRAV30A0A087WSZ9 112 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 IZUMO1RA6ND01 250 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 PGPEP1LA6NFU8 196 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 ODF3BA8MYP8 253 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 HYPMO75409 117 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 GOSR1O95249 250 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
COL17A1-204ENST00000433822 AMY1AP04745 511 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 GP9P14770 177 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 PRTN3P24158 256 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 HTR1DP28221 377 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 GPR6P46095 362 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-204ENST00000433822 UQCRFS1P47985 274 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 RAB4BP61018 213 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 DIAPH2-AS1Q14236 149 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 KLK9Q2XQG4 91 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 C10orf55Q5SWW7 151 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 IBA57Q5T440 356 aaKnown RBP5.91□□□□□ -1.46
COL17A1-204ENST00000433822 TPTE2P1Q5T6R2 138 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 MINOS1Q5TGZ0 78 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 CCDC144NLQ6NUI1 221 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 MRPL52Q86TS9 123 aaKnown RBP5.91□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF329Q86UD4 541 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 LYPD1Q8N2G4 141 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 C5orf17Q8NAS9 161 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 OR5T1Q8NG75 326 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 OR2T6Q8NHC8 308 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 SRSF12Q8WXF0 261 aaKnown RBP5.91□□□□□ -1.46
COL17A1-204ENST00000433822 FMC1Q96HJ9 113 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 ATG101Q9BSB4 218 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 DPM3Q9P2X0 92 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 SH3BGRL2Q9UJC5 107 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 KLK9Q9UKQ9 250 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 MINOS1-NBL1R4GNA1 71 aa5.91□□□□□ -1.46
COL17A1-204ENST00000433822 I3L2K1 104 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 CCL21O00585 134 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 TOMM40O96008 361 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 IGLC1P0CG04 106 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 HIST1H1EP10412 219 aaKnown RBP5.9□□□□□ -1.46
COL17A1-204ENST00000433822 CRISP2P16562 243 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 GATA2P23769 480 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-204ENST00000433822 COL8A2P25067 703 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 TPPP2P59282 170 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 SSBP2P81877 361 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-204ENST00000433822 ADORA2A-AS1P86434 159 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 EBI3Q14213 229 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 TNXAQ16473 311 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 LINC00305Q7Z4B0 112 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 CFHR4Q92496 578 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 GRAMD2BQ96HH9 432 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 TMEM68Q96MH6 324 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 GPR82Q96P67 336 aa5.9□□□□□ -1.46
COL17A1-204ENST00000433822 JMJD8Q96S16 334 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms