RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 FOSL1P15407 271 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 SRSF12Q8WXF0 261 aaKnown RBP10.88□□□□□ -0.67
COL6A3-207ENST00000433762 ZNF124Q15973 351 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 Q86TA4 180 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 RPEQ96AT9 228 aa10.88□□□□□ -0.67
COL6A3-207ENST00000433762 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
COL6A3-207ENST00000433762 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 PLAUP00749 431 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 BTF3P20290 206 aaKnown RBP10.87□□□□□ -0.67
COL6A3-207ENST00000433762 COL5A1-AS1Q5SY13 56 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 PRR27Q6MZM9 219 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 LY6G5BQ8NDX9 201 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 SLC25A39Q9BZJ4 359 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-207ENST00000433762 PPIAL4CA0A0B4J2A2 164 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 A0A1B0GW15 77 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 CRXO43186 299 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-207ENST00000433762 PPIAL4GP0DN37 164 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 ZNF48Q96MX3 618 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-207ENST00000433762 RASL11BQ9BPW5 248 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 ZFP30Q9Y2G7 519 aa10.87□□□□□ -0.67
COL6A3-207ENST00000433762 APC2O95996 2303 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 IGHV3-72A0A0B4J1Y9 119 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 HAX1O00165 279 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 FAM87AP0C7U9 286 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 PSG1P11464 419 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 ARL6IP6Q8N6S5 226 aa10.86□□□□□ -0.67
COL6A3-207ENST00000433762 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
COL6A3-207ENST00000433762 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.85□□□□□ -0.67
COL6A3-207ENST00000433762 M0R2Z0 102 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 CNTFRP26992 372 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 RAB1BQ9H0U4 201 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 TRAV30A0A087WSZ9 112 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 TRAV9-2A0A087WT02 112 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 H3BRN7 92 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 LIPFP07098 398 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 OR5AL1P0C617 328 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 NTF3P20783 257 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 BPIFA4PQ86YQ2 179 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 NPBQ8NG41 125 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 ACACAQ13085 2346 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 LOC400499M0QZD8 3231 aa10.85□□□□□ -0.67
COL6A3-207ENST00000433762 CEP295Q9C0D2 2601 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 SERTM2A0A1B0GWG4 89 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 C2orf70A6NJV1 201 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 K7EQM0 130 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 DLEU1O43261 78 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 NDUFA3O95167 84 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 IGLV2-11P01706 119 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 LYZP61626 148 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 Q6AWC8 147 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 FAM19A2Q8N3H0 131 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 LINC00614P0C842 121 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 PDE6HQ13956 83 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
COL6A3-207ENST00000433762 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 LPAR2Q9HBW0 351 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
COL6A3-207ENST00000433762 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 CEACAM3P40198 252 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 CAMPP49913 170 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 TCF24Q7RTU0 167 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 MUC15Q8N387 334 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 OR4F17Q8NGA8 305 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 WNT10AQ9GZT5 417 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 NBEAQ8NFP9 2946 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 K7EIM0 57 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 K7ENP7 123 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 M0R1W7 72 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
COL6A3-207ENST00000433762 ZNF25P17030 456 aaPredicted RBP10.83□□□□□ -0.68
COL6A3-207ENST00000433762 COL8A1P27658 744 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
COL6A3-207ENST00000433762 RNASEKQ6P5S7 137 aaKnown RBP10.83□□□□□ -0.68
COL6A3-207ENST00000433762 OR2D3Q8NGH3 330 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 TMEM70Q9BUB7 260 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 SH3BGRL2Q9UJC5 107 aa10.83□□□□□ -0.68
COL6A3-207ENST00000433762 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-207ENST00000433762 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
COL6A3-207ENST00000433762 NBR2O15453 112 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 EBLN2Q6P2I7 272 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 IGFBPL1Q8WX77 278 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 TXN2Q99757 166 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 DPM3Q9P2X0 92 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 ASPMQ8IZT6 3477 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 WI2-2373I1.2A0A1W2PRP0 233 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 HTR1DP28221 377 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 ZNF672Q499Z4 452 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-207ENST00000433762 URB1-AS1Q96HZ7 61 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms