RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
NEFM-202ENST00000433454 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
NEFM-202ENST00000433454 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
NEFM-202ENST00000433454 MRPL27Q9P0M9 148 aaKnown RBP8.22□□□□□ -1.09
NEFM-202ENST00000433454 TGOLN2O43493 480 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
NEFM-202ENST00000433454 IGHG4P01861 327 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 SMR3AQ99954 134 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 PAXXQ9BUH6 204 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 PUS1Q9Y606 427 aaKnown RBP eCLIP8.21□□□□□ -1.1
NEFM-202ENST00000433454 A0A0G2JLM5 398 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 FAM74A7A6NL05 159 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 TMEM250H0YL14 139 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 PDE6DO43924 150 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.1
NEFM-202ENST00000433454 GUCA2BQ16661 112 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 ZNF329Q86UD4 541 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 KLK15Q9H2R5 256 aa8.21□□□□□ -1.1
NEFM-202ENST00000433454 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 PYYP10082 97 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 SRD5A1P18405 259 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 ATP5G3P48201 142 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 RAB9AP51151 201 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 SLC35B1P78383 322 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 RELQ04864 619 aaPredicted RBP8.2□□□□□ -1.1
NEFM-202ENST00000433454 KIAA0141Q14154 515 aaPredicted RBP8.2□□□□□ -1.1
NEFM-202ENST00000433454 LEMD1Q68G75 181 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 Q8N2B8 174 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 CDC42EP3Q9UKI2 254 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 YTHDF2Q9Y5A9 579 aaKnown RBP8.2□□□□□ -1.1
NEFM-202ENST00000433454 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
NEFM-202ENST00000433454 H3BRN7 92 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 BMPR1BO00238 502 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 SNAPINO95295 136 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 LY6G6DO95868 133 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 PSMB8P28062 276 aa8.2□□□□□ -1.1
NEFM-202ENST00000433454 IGHV3-35A0A0C4DH35 117 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 GP9P14770 177 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 S100A7P31151 101 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 FAM90A2PQ658T7 463 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.19□□□□□ -1.1
NEFM-202ENST00000433454 A0A1W2PRE2 83 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 F6UZH7 168 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 CLDN34H7C241 214 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 ARL3P36405 182 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 TEX38Q6PEX7 206 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 FXYD5Q96DB9 178 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 RABAC1Q9UI14 185 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 RNF24Q9Y225 148 aa8.19□□□□□ -1.1
NEFM-202ENST00000433454 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 IGHV3-11P01762 117 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 ZNF418Q8TF45 676 aaPredicted RBP8.18□□□□□ -1.1
NEFM-202ENST00000433454 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
NEFM-202ENST00000433454 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 ESM1Q9NQ30 184 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 TMEM14CQ9P0S9 112 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 ZNF98A6NK75 572 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 SCO1O75880 301 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 FOXE3Q13461 319 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 FAM209BQ5JX69 171 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 ZNF343Q6P1L6 599 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 BPIFA4PQ86YQ2 179 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
NEFM-202ENST00000433454 RPUSD4Q96CM3 377 aaKnown RBP8.18□□□□□ -1.1
NEFM-202ENST00000433454 GGTLC3B5MD39 225 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 ELANEP08246 267 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 ATRAIDQ6UW56 229 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 C10orf99Q6UWK7 81 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 SMIM7Q9BQ49 75 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 PARLQ9H300 379 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 SERTAD4Q9NUC0 356 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
NEFM-202ENST00000433454 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 ZNF727A8MUV8 499 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 H3BQ15 152 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 M0R036 132 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 NBEAP1P0C6P0 100 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 CD99P14209 185 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 FOSL1P15407 271 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 FAM74A3Q4VXF1 159 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 OR4F17Q8NGA8 305 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 BLNKQ8WV28 456 aa8.17□□□□□ -1.1
NEFM-202ENST00000433454 HIVEP1P15822 2718 aa8.16□□□□□ -1.1
NEFM-202ENST00000433454 SCO2A0A1W2PP80 73 aa8.16□□□□□ -1.1
NEFM-202ENST00000433454 RNASE1P07998 156 aaKnown RBP8.16□□□□□ -1.1
NEFM-202ENST00000433454 HIST1H1EP10412 219 aaKnown RBP8.16□□□□□ -1.1
NEFM-202ENST00000433454 RPL15P61313 204 aaKnown RBP8.16□□□□□ -1.1
NEFM-202ENST00000433454 NDUFB4O95168 129 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms