RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 PRR31Q5SQ13 230 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 OSTCQ9NRP0 149 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
RFTN1-203ENST00000432519 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 RNF224P0DH78 156 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 LINC00310P59036 64 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 C1orf122Q6ZSJ8 110 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 ASCL2Q99929 193 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 MRPL54Q6P161 138 aaKnown RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 C7orf69Q9H7B7 122 aa11.54□□□□□ -0.56
RFTN1-203ENST00000432519 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
RFTN1-203ENST00000432519 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
RFTN1-203ENST00000432519 S100A12P80511 92 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 Q9H3A6 140 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 POLQO75417 2590 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 ZNF705GA8MUZ8 300 aaPredicted RBP11.53□□□□□ -0.56
RFTN1-203ENST00000432519 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 TAS2R60P59551 318 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 ARPC1AQ92747 370 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 NUDT10Q8NFP7 164 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
RFTN1-203ENST00000432519 GZMBP10144 247 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 TMEM11P17152 192 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 CD33P20138 364 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 SAA4P35542 130 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
RFTN1-203ENST00000432519 FAM209BQ5JX69 171 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
RFTN1-203ENST00000432519 ZANQ9Y493 2812 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 FBN2P35556 2912 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 IGHV3OR16-10A0A075B7F0 116 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 IGHV7-81A0A0B4J1V7 117 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 VWC2LB2RUY7 222 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 OVOL3O00110 214 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 NDUFB8O95169 186 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 IL4P05112 153 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 TMEM183BQ1AE95 376 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 Q8N9W7 124 aa11.52□□□□□ -0.57
RFTN1-203ENST00000432519 LINC01548A6NM66 108 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 EBI3Q14213 229 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 OR2J3O76001 311 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 KLF12Q9Y4X4 402 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
RFTN1-203ENST00000432519 LRRK2Q5S007 2527 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 TCRAP04437 139 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 MLST8Q9BVC4 326 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 UBE2G1P62253 170 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
RFTN1-203ENST00000432519 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
RFTN1-203ENST00000432519 TRAV9-1A0A075B6T8 112 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 UBE2E1P51965 193 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
RFTN1-203ENST00000432519 GDF5OSQ5U4N7 250 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 C5orf17Q8NAS9 161 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 ATG101Q9BSB4 218 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFTN1-203ENST00000432519 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 GNG7O60262 68 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
RFTN1-203ENST00000432519 RAB4BP61018 213 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 TTC9CQ8N5M4 171 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 PRO1933Q9H354 126 aa11.49□□□□□ -0.57
RFTN1-203ENST00000432519 TRAV20A0A0B4J274 112 aa11.48□□□□□ -0.57
RFTN1-203ENST00000432519 H3BRN7 92 aa11.48□□□□□ -0.57
RFTN1-203ENST00000432519 TOMM40O96008 361 aa11.48□□□□□ -0.57
RFTN1-203ENST00000432519 IGLV2-11P01706 119 aa11.48□□□□□ -0.57
RFTN1-203ENST00000432519 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
RFTN1-203ENST00000432519 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms