RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TIMM17AQ99595 171 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SLC25A2Q9BXI2 301 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 REG4Q9BYZ8 158 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 IMUPQ9GZP8 106 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF586Q9NXT0 402 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TAS2R8Q9NYW2 309 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF492Q9P255 531 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF222Q9UK12 451 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TCHHQ07283 1943 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 LTN1O94822 1766 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SNRNP200O75643 2136 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 CCDC88BA6NC98 1476 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 POLA1P09884 1462 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 MCM3APO60318 1980 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SBF2Q86WG5 1849 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 DAPK1P53355 1430 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ADAMTS13Q76LX8 1427 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 HEATR5AQ86XA9 2040 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TRGV10A0A0A0MS01 117 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TRBV7-6A0A0J9YX20 115 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 A0A1W2PP18 115 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ARRDC5A6NEK1 342 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF705GA8MUZ8 300 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 TMEM256-PLSCR3K7ERE1 68 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 K7ERJ3 54 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 CDC42EP2O14613 210 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 NCR2O95944 276 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1-5P01602 117 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 IGLV3-27P01718 113 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 APOC3P02656 99 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SEC11BP0C7V7 166 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TRAPPC2P0DI81 140 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TRAPPC2BP0DI82 140 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 RNASE2P10153 161 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 HIST1H1DP16402 221 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 PSMB8P28062 276 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 CA7P43166 264 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 INPP1P49441 399 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 C6orf52Q5T4I8 152 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 LAIR2Q6ISS4 152 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 MRPL54Q6P161 138 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 LCA10Q71F78 164 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 MDP1Q86V88 176 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 GPHB5Q86YW7 130 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZFP62Q8NB50 900 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 RPS4Y2Q8TD47 263 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 RTN4IP1Q8WWV3 396 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 MAL2Q969L2 176 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TOMM6Q96B49 74 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 MIEN1Q9BRT3 115 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 CHAC1Q9BUX1 264 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 MRPL32Q9BYC8 188 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 TMEM191AQ9H0A3 160 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SAR1AQ9NR31 198 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 FKBP11Q9NYL4 201 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 MYO5AQ9Y4I1 1855 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 CEP170Q5SW79 1584 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 NSD3Q9BZ95 1437 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 COL27A1Q8IZC6 1860 aaPredicted RBP1.66□□□□□ -2.14
CLK1-204ENST00000432425 ARAP3Q8WWN8 1544 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1-12A0A0C4DH73 117 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 A0A0D9SEW6 157 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 OR51F1A6NGY5 319 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 OR2T8A6NH00 312 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 CD300LBA8K4G0 201 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 A8MWV9 139 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 BUB1B-PAK6H3BSN5 160 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 UBE2L6O14933 153 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 SLC37A4O43826 429 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 KRASP01116 189 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 LTAP01374 205 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1-39P01597 117 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1D-12P01611 117 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 BGLAPP02818 100 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 MT-ND6P03923 174 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1D-39P04432 117 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 TLX1NBP0CAT3 122 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IGLC1P0CG04 106 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ZNF705DP0CH99 300 aaPredicted RBP1.66□□□□□ -2.14
CLK1-204ENST00000432425 RRN3P1Q2M238 152 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ORMDL2Q53FV1 153 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 PRR9Q5T870 116 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 C22orf39Q6P5X5 142 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 UNQ5815/PRO19632Q6UWF5 114 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ALKAL2Q6UX46 152 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 IZUMO2Q6UXV1 221 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 AAED1Q7RTV5 226 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 MSRB3Q8IXL7 192 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ZNF555Q8NEP9 628 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 OR1J4Q8NGS1 313 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 OR4A5Q8NH83 315 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 FAM57AQ8TBR7 257 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 MS4A6EQ96DS6 147 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 VAMP8Q9BV40 100 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ATG5Q9H1Y0 275 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 C16orf95Q9H693 158 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 RPRMQ9NS64 109 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 CKLFQ9UBR5 152 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms