RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TXNDC17Q9BRA2 123 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 COMMD5Q9GZQ3 224 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 TNFRSF19Q9NS68 423 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 LY96Q9Y6Y9 160 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 A0A1W2PRE2 83 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 IZUMO1RA6ND01 250 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 KLK10O43240 276 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 COX7A2P2O60397 106 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 CEACAM4O75871 244 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 DLX6P56179 175 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 C1orf185Q5T7R7 199 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 C10orf113Q5VZT2 155 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 RNASEKQ6P5S7 137 aaKnown RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 LINC00528Q8N1L1 170 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 EXOC3-AS1Q8N2X6 119 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 CIARTQ8N365 385 aaPredicted RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 OR2D3Q8NGH3 330 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 CORO2AQ92828 525 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF714Q96N38 554 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 PMCHL2Q9BQD1 86 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 PGPEP1Q9NXJ5 209 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 LINC00312Q9Y6C7 94 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 ENSAO43768 121 aaKnown RBP5.72□□□□□ -1.49
COL28A1-202ENST00000430711 IGLL1P15814 213 aa5.72□□□□□ -1.49
COL28A1-202ENST00000430711 TMEM177Q53S58 311 aa5.72□□□□□ -1.49
COL28A1-202ENST00000430711 FAM169BQ8N8A8 192 aa5.72□□□□□ -1.49
COL28A1-202ENST00000430711 OR5B3Q8NH48 314 aa5.72□□□□□ -1.49
COL28A1-202ENST00000430711 FLYWCH2Q96CP2 140 aaKnown RBP5.72□□□□□ -1.49
COL28A1-202ENST00000430711 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
COL28A1-202ENST00000430711 SPTA1P02549 2419 aa5.72□□□□□ -1.49
COL28A1-202ENST00000430711 TRAV9-1A0A075B6T8 112 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 A0A1B0GXF2 115 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 TCRBV4S1A1TA0A5B7 111 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 hDV102S1A0JD36 115 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 PGPA6NDG6 321 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 C17orf100A8MU93 164 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 TNFRSF13BO14836 293 aaPredicted RBP5.71□□□□□ -1.49
COL28A1-202ENST00000430711 MT-CO2P00403 227 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 PRRX1P54821 245 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 Q6ZN92 141 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 OR10X1Q8NGY0 326 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 TMEM167AQ8TBQ9 72 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 PGLYRP4Q96LB8 373 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 CHODLQ9H9P2 273 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF586Q9NXT0 402 aa5.71□□□□□ -1.49
COL28A1-202ENST00000430711 PTPN13Q12923 2485 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 hADV38S2A0JD32 116 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 FNDC10F2Z333 226 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 TMEM178BH3BS89 294 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 SLC25A5P05141 298 aaKnown RBP5.71□□□□□ -1.5
COL28A1-202ENST00000430711 FAM106CPP0CH98 169 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 GP9P14770 177 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 GRNP28799 593 aaKnown RBP5.71□□□□□ -1.5
COL28A1-202ENST00000430711 CEACAM8P31997 349 aaPredicted RBP5.71□□□□□ -1.5
COL28A1-202ENST00000430711 TBR1Q16650 682 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 FAM106AQ4KMX7 169 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 OR10J3Q5JRS4 329 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 KLF17Q5JT82 389 aaPredicted RBP5.71□□□□□ -1.5
COL28A1-202ENST00000430711 ADTRPQ96IZ2 230 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 RNF2Q99496 336 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 GOLT1BQ9Y3E0 138 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 SELENOKQ9Y6D0 94 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 MYO9AB2RTY4 2548 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 CUBNO60494 3623 aa5.71□□□□□ -1.5
COL28A1-202ENST00000430711 MUC21A0A0G2JKD1 596 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 MUC21A0A140T8X8 626 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 CCL25O15444 150 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TCF21O43680 179 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 IGLV2-11P01706 119 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 HLA-DQA1P01909 254 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TCTAP57738 103 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 MUC21Q5SSG8 566 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 Q6ZS92 163 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 SSX8Q7RTT4 187 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 ZADH2Q8N4Q0 377 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 OR4F17Q8NGA8 305 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
COL28A1-202ENST00000430711 OR8B2Q96RD0 313 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TUBG2Q9NRH3 451 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TRBV9A0A0B4J1U6 114 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TEX22C9J3V5 150 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 H0Y8G0 127 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 AVPP01185 164 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 APOA2P02652 100 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TSPOP30536 169 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 FXYD7P58549 80 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TAS2R45P59539 299 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 SELENOVP59797 346 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 MZT1Q08AG7 82 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 TEX45Q8NA69 505 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 Q8NA96 180 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 FBXL15Q9H469 300 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 NCOR1P1Q9H4R4 102 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms