RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GCHFRP30047 84 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 C19orf24Q9BVV8 132 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 PARD6GQ9BYG4 376 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-207ENST00000429896 RNF114Q9Y508 228 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 APOMO95445 188 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 ASIPP42127 132 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 LHFPL1Q86WI0 220 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 OR10AG1Q8NH19 301 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 ZNRD1Q9P1U0 126 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 PEX7O00628 323 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 EVI2AP22794 236 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 CDX1P47902 265 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-207ENST00000429896 LINC00473A8K010 186 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 VENTXO95231 258 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
PTCH1-207ENST00000429896 FBLN7Q53RD9 439 aa10.47□□□□□ -0.73
PTCH1-207ENST00000429896 LINC00311Q8N616 119 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 SIGLEC9Q9Y336 463 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 FOLR2P14207 255 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 MRPL32Q9BYC8 188 aaKnown RBP10.46□□□□□ -0.73
PTCH1-207ENST00000429896 LIME1Q9H400 295 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 CD7P09564 240 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 HIST2H2BCQ6DN03 193 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
PTCH1-207ENST00000429896 EML5Q05BV3 1969 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 HLA-DRB1P01911 266 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 LDLRAD2Q5SZI1 272 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-207ENST00000429896 Q6ZSR3 168 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 TCF24Q7RTU0 167 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 OR52E5Q8NH55 327 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.74
PTCH1-207ENST00000429896 PHF3Q92576 2039 aaKnown RBP10.46□□□□□ -0.74
PTCH1-207ENST00000429896 CFAP161Q6P656 301 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 UBE2DNLQ8IWF7 75 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 C2orf88Q9BSF0 95 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-207ENST00000429896 HOXA3O43365 443 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-207ENST00000429896 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 REC114Q7Z4M0 266 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-207ENST00000429896 CARHSP1Q9Y2V2 147 aaKnown RBP10.45□□□□□ -0.74
PTCH1-207ENST00000429896 RPS20P60866 119 aaKnown RBP10.45□□□□□ -0.74
PTCH1-207ENST00000429896 MIR17HGQ75NE6 70 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
PTCH1-207ENST00000429896 C15orf65H3BRN8 121 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 JOSD1Q15040 202 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-207ENST00000429896 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-207ENST00000429896 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 C22orf34Q6ZV56 151 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 OR10W1Q8NGF6 305 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 ATP5G3P48201 142 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 PMCHL1Q16048 86 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 MSMPQ1L6U9 139 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 IGKV1-6A0A0C4DH72 117 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 DEFB112Q30KQ8 113 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF329Q86UD4 541 aa10.44□□□□□ -0.74
PTCH1-207ENST00000429896 HLA-DQA1P01909 254 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 TXNDC17Q9BRA2 123 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 RNF126Q9BV68 326 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 PVRIGQ6DKI7 326 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF600Q6ZNG1 722 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 GATAD1Q8WUU5 269 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 USMG5Q96IX5 58 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
PTCH1-207ENST00000429896 PAX8Q06710 450 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 FAM120AOSQ5T036 256 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF414Q96IQ9 312 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-207ENST00000429896 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-207ENST00000429896 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 ZNF585BQ52M93 769 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 LRTM2Q8N967 370 aa10.43□□□□□ -0.74
PTCH1-207ENST00000429896 LOC105371267A0A1B0GV96 52 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 HBBP68871 147 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 CTAG1AP78358 180 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 MST1LQ2TV78 715 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 NPCDR1Q9BY65 106 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
PTCH1-207ENST00000429896 MED13Q9UHV7 2174 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 SAP30O75446 220 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 LINC00205P59089 165 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 MMP23AO75900 390 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 LEPP41159 167 aa10.42□□□□□ -0.74
PTCH1-207ENST00000429896 LOXL1Q08397 574 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms