RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 H3BRN7 92 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
MBD4-203ENST00000429544 EGR2P11161 476 aaPredicted RBP12.76□□□□□ -0.37
MBD4-203ENST00000429544 MFAP4P55083 255 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 ZNF491Q8N8L2 437 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 RNF125Q96EQ8 232 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 CCL19Q99731 98 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 ATG101Q9BSB4 218 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 IGHV3-23P01764 117 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 HIST1H1EP10412 219 aaKnown RBP12.76□□□□□ -0.37
MBD4-203ENST00000429544 Q56UQ5 140 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 FAM168AQ92567 244 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 C1RLQ9NZP8 487 aa12.76□□□□□ -0.37
MBD4-203ENST00000429544 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
MBD4-203ENST00000429544 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 SNURFLB1AK76 121 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 NPFFO15130 113 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 GATCO43716 136 aaKnown RBP12.75□□□□□ -0.37
MBD4-203ENST00000429544 OR2J3O76001 311 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 NDUFB8O95169 186 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 BRS3P32247 399 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
MBD4-203ENST00000429544 TRAV30A0A087WSZ9 112 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 SMIM27A0A1W2PRY6 76 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 F8W735 103 aaPredicted RBP12.74□□□□□ -0.37
MBD4-203ENST00000429544 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 TCRAP04437 139 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 FAM231DQ6ZW35 169 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 EXOC3-AS1Q8N2X6 119 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 NUDT11Q96G61 164 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 C21orf62Q9NYP8 219 aa12.74□□□□□ -0.37
MBD4-203ENST00000429544 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 HLA-DRB1P01911 266 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 MRPL54Q6P161 138 aaKnown RBP12.73□□□□□ -0.37
MBD4-203ENST00000429544 BCL6BQ8N143 479 aaPredicted RBP12.73□□□□□ -0.37
MBD4-203ENST00000429544 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 IGHV3OR16-10A0A075B7F0 116 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 CENPVL3A0A0U1RRI6 287 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
MBD4-203ENST00000429544 USF2Q15853 346 aaPredicted RBP12.73□□□□□ -0.37
MBD4-203ENST00000429544 BPIFA4PQ86YQ2 179 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 FMC1Q96HJ9 113 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 ZNF48Q96MX3 618 aaPredicted RBP12.73□□□□□ -0.37
MBD4-203ENST00000429544 THYN1Q9P016 225 aa12.73□□□□□ -0.37
MBD4-203ENST00000429544 IGHV4-61A0A0C4DH41 118 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 RNF224P0DH78 156 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
MBD4-203ENST00000429544 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 GPR82Q96P67 336 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 GNB1LQ9BYB4 327 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 TRBV9A0A0B4J1U6 114 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 ECSCRQ19T08 205 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 GRAMD2BQ96HH9 432 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 FBXL7Q9UJT9 491 aa12.72□□□□□ -0.37
MBD4-203ENST00000429544 ACACBO00763 2458 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 IZUMO1RA6ND01 250 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
MBD4-203ENST00000429544 RAB4BP61018 213 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 UNQ5815/PRO19632Q6UWF5 114 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 CMTM2Q8TAZ6 248 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 NAT8BQ9UHF3 227 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 POLR3KQ9Y2Y1 108 aaPredicted RBP12.71□□□□□ -0.37
MBD4-203ENST00000429544 TRBV19A0A075B6N1 114 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 LINC00587B1AMM8 73 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 ATP6V0E1O15342 81 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 LTAP01374 205 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 AMY1AP04745 511 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 IGLC2P0DOY2 106 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
MBD4-203ENST00000429544 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 PAX8Q06710 450 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 C10orf105Q8TEF2 133 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 MLST8Q9BVC4 326 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 NUPR1O60356 82 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 CRISP2P16562 243 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 Q86TA4 180 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 FAM110DQ8TAY7 271 aaPredicted RBP12.7□□□□□ -0.38
MBD4-203ENST00000429544 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
MBD4-203ENST00000429544 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms