RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PLA2G5P39877 138 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 ATP5L2Q7Z4Y8 100 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 MDP1Q86V88 176 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 FGFBP3Q8TAT2 258 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 HEATR1Q9H583 2144 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 MFAP4P55083 255 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 EML5Q05BV3 1969 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 TRAV24A0A0B4J272 114 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 SMIM27A0A1W2PRY6 76 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 RRHO14718 337 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 EDDM3AQ14507 147 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 CHAC1Q9BUX1 264 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 TRIOO75962 3097 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 FNDC10F2Z333 226 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 FOXH1O75593 365 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 IGKV1-5P01602 117 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 DLX4Q92988 240 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 SPRY4Q9C004 299 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 FAM234AQ9H0X4 552 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 DNAH14Q0VDD8 3507 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 APC2O95996 2303 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 DYNLRB1Q9NP97 96 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
SYNGAP1-203ENST00000428982 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 A8MWV9 139 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 EVI2AP22794 236 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 PRTN3P24158 256 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 RND1Q92730 232 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 SNRNP40Q96DI7 357 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 SGK494Q96LW2 274 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 AMMECR1Q9Y4X0 333 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 FCGR3BO75015 233 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 RIGQ13278 110 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 C2orf91Q6ZV80 131 aa11.8□□□□□ -0.52
SYNGAP1-203ENST00000428982 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 PROK2Q9HC23 129 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 COL8A1P27658 744 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 CRIP3Q6Q6R5 217 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 ENSAO43768 121 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 RPL30P62888 115 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 LINC01545Q5VT33 79 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
SYNGAP1-203ENST00000428982 SRSF9Q13242 221 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYNGAP1-203ENST00000428982 TMEM126AQ9H061 195 aa11.78□□□□□ -0.52
SYNGAP1-203ENST00000428982 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.52
SYNGAP1-203ENST00000428982 CRXO43186 299 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-203ENST00000428982 EFNB3Q15768 340 aa11.77□□□□□ -0.52
SYNGAP1-203ENST00000428982 IGLL5B9A064 214 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 NTF4P34130 210 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 INSL3P51460 131 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 MIR17HGQ75NE6 70 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 PTH2Q96A98 100 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 A4D1N5 150 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 FAM90A9PA6NNJ1 464 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 AREGP15514 252 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 CD24P25063 80 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 FXYD2P54710 66 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 PPP1R27Q86WC6 154 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 WIPF2Q8TF74 440 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 KLRB1Q12918 225 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 HOXA3O43365 443 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 VCANP13611 3396 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 GLRXP35754 106 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 NDUFV3P56181 108 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 WDR87Q6ZQQ6 2873 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 OR2J3O76001 311 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 XGP55808 180 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 SPRR3Q9UBC9 169 aa11.76□□□□□ -0.53
SYNGAP1-203ENST00000428982 CCDC179H3BU77 68 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF146Q15072 292 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 RPEQ96AT9 228 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 IDI2-AS1Q9NZ38 188 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 SUB1P53999 127 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 RFESDQ8TAC1 157 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 FBXL15Q9H469 300 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 TGFAP01135 160 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 Q6P435 159 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms