RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 TRBV6-7A0A0A0MS04 114 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 FBLL1A6NHQ2 334 aaKnown RBP5.86□□□□□ -1.47
CNOT4-206ENST00000428680 ICMTO60725 284 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF253O75346 499 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 EVI2AP22794 236 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 HIST1H3AP68431 136 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 RUNX1Q01196 453 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 Q8TCH9 128 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 RNF183Q96D59 192 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 TM2D1Q9BX74 207 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 IGLV3-9A0A075B6K5 115 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 IGHV4-38-2P0DP08 117 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM37Q8WXS4 190 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF815PA8K554 130 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 SRIP30626 198 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 SMIM8Q96KF7 97 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 MAP1LC3AQ9H492 121 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 AURKAIP1Q9NWT8 199 aaPredicted RBP5.85□□□□□ -1.47
CNOT4-206ENST00000428680 PHF3Q92576 2039 aaKnown RBP5.85□□□□□ -1.47
CNOT4-206ENST00000428680 C19orf84I3L1E1 186 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 CD55P08174 381 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 LRTM2Q8N967 370 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 MRPS16Q9Y3D3 137 aaKnown RBP5.85□□□□□ -1.47
CNOT4-206ENST00000428680 A0A1B0GWJ7 208 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 GRIFINA4D1Z8 144 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 C1QBP02746 253 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 LOXP28300 417 aaPredicted RBP5.85□□□□□ -1.47
CNOT4-206ENST00000428680 MYCNOSP40205 109 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 TAS2R60P59551 318 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 RPL15P61313 204 aaKnown RBP5.85□□□□□ -1.47
CNOT4-206ENST00000428680 FOXB2Q5VYV0 432 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 CYB561D1Q8N8Q1 229 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 NAT8Q9UHE5 227 aa5.85□□□□□ -1.47
CNOT4-206ENST00000428680 VPS13CQ709C8 3753 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 ADARB2-AS1A8MUL3 147 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 IGLV1-44P01699 117 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 PSG1P11464 419 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 RAB24Q969Q5 203 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 PRR14LQ5THK1 2151 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 C22orf46C9J442 243 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 PIN1P1O15428 100 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 SMIM18P0DKX4 95 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 NAT1P18440 290 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 GUSBP1Q15486 140 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 IBA57Q5T440 356 aaKnown RBP5.84□□□□□ -1.47
CNOT4-206ENST00000428680 OR8A1Q8NGG7 326 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 HIST1H2BAQ96A08 127 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 GGACTQ9BVM4 153 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 MAP1LC3CQ9BXW4 147 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 SLC35B3Q9H1N7 401 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 PROK2Q9HC23 129 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 MRPL27Q9P0M9 148 aaKnown RBP5.84□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF319Q9P2F9 582 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 LOC102724200A0A096LPH7 203 aaPredicted RBP5.84□□□□□ -1.47
CNOT4-206ENST00000428680 TRAV12-3A0A0B4J271 114 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 RBFOX3A6NFN3 312 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 H3BRM9 83 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 CLPSP04118 112 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 GATA2P23769 480 aaPredicted RBP5.84□□□□□ -1.47
CNOT4-206ENST00000428680 CRYBB3P26998 211 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 SPSB4Q96A44 273 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 LYZL4Q96KX0 146 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 CLDN16Q9Y5I7 305 aa5.84□□□□□ -1.47
CNOT4-206ENST00000428680 HECTD1Q9ULT8 2610 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 H0YJW9 148 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 RAMP3O60896 148 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 ATP5LO75964 103 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 CD8AP01732 235 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 DMRTA1Q5VZB9 504 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 NUDT10Q8NFP7 164 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 OR10W1Q8NGF6 305 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 SLC25A38Q96DW6 304 aa5.84□□□□□ -1.48
CNOT4-206ENST00000428680 SLC25A39Q9BZJ4 359 aaPredicted RBP5.84□□□□□ -1.48
CNOT4-206ENST00000428680 NXT2Q9NPJ8 142 aaKnown RBP5.84□□□□□ -1.48
CNOT4-206ENST00000428680 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.48
CNOT4-206ENST00000428680 PRR32B1ATL7 298 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 NDUFB4O95168 129 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 DEFB136Q30KP8 78 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 SIGIRRQ6IA17 410 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 OR5AC2Q9NZP5 309 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 FUT9Q9Y231 359 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 ARL14EPLP0DKL9 152 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
CNOT4-206ENST00000428680 INSL3P51460 131 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 IGKV1-9A0A0C4DH69 117 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 TEX48A0A1B0GUV7 120 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 DNAJC9-AS1A6NH13 148 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM86BQ8N661 226 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 C15orf53Q8NAA6 179 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 C2CD4CQ8TF44 421 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 PGLYRP4Q96LB8 373 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 TP53RKQ96S44 253 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 ATRQ13535 2644 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 YLPM1P49750 1951 aaKnown RBP5.83□□□□□ -1.48
CNOT4-206ENST00000428680 ZNF98A6NK75 572 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 CGAP01215 116 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 HLA-DQB1P01920 261 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms