RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 C1orf194Q5T5A4 169 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 CYP2G1PQ6ZSU1 146 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 BPIFCQ8NFQ6 507 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 NRN1Q9NPD7 142 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
VRK2-204ENST00000428021 CSMD3Q7Z407 3707 aa12.27□□□□□ -0.44
VRK2-204ENST00000428021 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 C3orf84H3BNL1 204 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 SIX6O95475 246 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 SLC45A2Q9UMX9 530 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.45
VRK2-204ENST00000428021 GOSR2O14653 212 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 SPRY2O43597 315 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 ORM2P19652 201 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 BCAP31P51572 246 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 S100A10P60903 97 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 SEPSECSQ9HD40 501 aaKnown RBP12.26□□□□□ -0.45
VRK2-204ENST00000428021 MGAT4CQ9UBM8 478 aa12.26□□□□□ -0.45
VRK2-204ENST00000428021 STARD9Q9P2P6 4700 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 ZNF98A6NK75 572 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 CST7O76096 145 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 CAV2P51636 162 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 PLP1P60201 277 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 PSMG4Q5JS54 123 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 PPP1R14BQ96C90 147 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 RNF183Q96D59 192 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 FBXL17Q9UF56 701 aa12.25□□□□□ -0.45
VRK2-204ENST00000428021 IGSF23A1L1A6 192 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 SOCS3O14543 225 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 PVALBP20472 110 aaPredicted RBP12.24□□□□□ -0.45
VRK2-204ENST00000428021 SELENOTP62341 195 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 SLC38A11Q08AI6 406 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 CASC10Q5T4H9 136 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
VRK2-204ENST00000428021 OR8I2Q8N0Y5 310 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 TMEM252Q8N6L7 170 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 TMEM147Q9BVK8 224 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 SLC25A32Q9H2D1 315 aa12.24□□□□□ -0.45
VRK2-204ENST00000428021 LYRM2Q9NU23 88 aaPredicted RBP12.24□□□□□ -0.45
VRK2-204ENST00000428021 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
VRK2-204ENST00000428021 LINC00869P0C866 280 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 LYL1P12980 280 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 STHQ8IWL8 128 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 TMEM217Q8N7C4 229 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 MGST2Q99735 147 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 NMES1Q9C002 83 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 DOK5Q9P104 306 aa12.23□□□□□ -0.45
VRK2-204ENST00000428021 H3BRN7 92 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 AGPAT2O15120 278 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 HYPMO75409 117 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 SULT1A1P50225 295 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 H2BFSP57053 126 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 SNRPD3P62318 126 aaKnown RBP12.22□□□□□ -0.45
VRK2-204ENST00000428021 VWC2Q2TAL6 325 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 PATE2Q6UY27 113 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 SCRT1Q9BWW7 348 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 SLC25A39Q9BZJ4 359 aaPredicted RBP12.22□□□□□ -0.45
VRK2-204ENST00000428021 SLC25A22Q9H936 323 aa12.22□□□□□ -0.45
VRK2-204ENST00000428021 H0YIZ8 118 aa12.21□□□□□ -0.45
VRK2-204ENST00000428021 OR5AC2Q9NZP5 309 aa12.21□□□□□ -0.45
VRK2-204ENST00000428021 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
VRK2-204ENST00000428021 TENM2Q9NT68 2774 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 CA1P00915 261 aaPredicted RBP12.2□□□□□ -0.46
VRK2-204ENST00000428021 S100A11P31949 105 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 GALR1P47211 349 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 PSMB3P49720 205 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 DEFB1P60022 68 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 RAP2BP61225 183 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 ZFAND6Q6FIF0 208 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 RSG1Q9BU20 258 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 WDR83OSQ9Y284 106 aa12.2□□□□□ -0.46
VRK2-204ENST00000428021 H3BMM0 161 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 SSNA1O43805 119 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 OR5G3P0C626 314 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 S100A7P31151 101 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 ID1P41134 155 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
VRK2-204ENST00000428021 EWSR1Q01844 656 aaKnown RBP eCLIP12.19□□□□□ -0.46
VRK2-204ENST00000428021 LRRC37A5PQ49AS3 106 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 STX12Q86Y82 276 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 GPR82Q96P67 336 aa12.19□□□□□ -0.46
VRK2-204ENST00000428021 DYNC2H1Q8NCM8 4307 aaKnown RBP12.18□□□□□ -0.46
VRK2-204ENST00000428021 A0A0J9YWU9 116 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms