RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 LY6G5BQ8NDX9 201 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 IGLV3-32A0A0A0MS00 114 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 NEUROG3Q9Y4Z2 214 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 CD5LO43866 347 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 RAMP3O60896 148 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 SFTA2Q6UW10 78 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 AMBPP02760 352 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 ABCA4P78363 2273 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 C6orf226Q5I0X4 101 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 GAGE12BA1L429 117 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 C9orf153Q5TBE3 101 aa11.97□□□□□ -0.49
PTPN13-203ENST00000427191 MRPL14Q6P1L8 145 aaKnown RBP11.97□□□□□ -0.49
PTPN13-203ENST00000427191 SYS1-DBNDD2H3BUS1 97 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 SRD5A1P18405 259 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 KIR3DS1Q14943 382 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.49
PTPN13-203ENST00000427191 UBL5Q9BZL1 73 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 WDR81Q562E7 1941 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 PMVKQ15126 192 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 CACNA1BQ00975 2339 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 IL18BPO95998 194 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 METRNQ9UJH8 293 aa11.96□□□□□ -0.5
PTPN13-203ENST00000427191 PRTN3P24158 256 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 SRSF2Q01130 221 aaKnown RBP11.95□□□□□ -0.5
PTPN13-203ENST00000427191 FDCSPQ8NFU4 85 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
PTPN13-203ENST00000427191 IGHV1-2P23083 117 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 PSG3Q16557 428 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 CEACAM8P31997 349 aaPredicted RBP11.95□□□□□ -0.5
PTPN13-203ENST00000427191 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 LINC01560Q8TB33 94 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 A0A0G2JMZ2 1700 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 LRRC37A2A6NM11 1700 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 LRRC37AA6NMS7 1700 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
PTPN13-203ENST00000427191 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 THBDP07204 575 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 SLC25A28Q96A46 364 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 PSCAO43653 123 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 RHODO00212 210 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 SNHG12Q9BXW3 62 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 LOC101059948A0A1B0GTJ6 334 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 PYYP10082 97 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 TMEM258P61165 79 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 WBP1Q96G27 269 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 TBX6O95947 436 aaPredicted RBP11.94□□□□□ -0.5
PTPN13-203ENST00000427191 LINC01551Q86U37 167 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
PTPN13-203ENST00000427191 F8W1H4 67 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 GVINP1Q7Z2Y8 2422 aa11.94□□□□□ -0.5
PTPN13-203ENST00000427191 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 C15orf32Q32M92 178 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 RSPO3Q9BXY4 272 aaPredicted RBP11.93□□□□□ -0.5
PTPN13-203ENST00000427191 S4R3C0 116 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 M0R1W7 72 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 GATA2P23769 480 aaPredicted RBP11.93□□□□□ -0.5
PTPN13-203ENST00000427191 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
PTPN13-203ENST00000427191 TRPT1Q86TN4 253 aaKnown RBP11.93□□□□□ -0.5
PTPN13-203ENST00000427191 IGHV3-11P01762 117 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 ZNF876PQ49A33 203 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 LY6G6FQ5SQ64 297 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 GLMPQ8WWB7 406 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 C1QCP02747 245 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 TCRAP04437 139 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 C4orf51C9J302 202 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 CSRP2Q16527 193 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 SUMO4Q6EEV6 95 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 TSC2P49815 1807 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 COLCA2A8K830 154 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
PTPN13-203ENST00000427191 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 BTCP35070 178 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 CSRP3P50461 194 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
PTPN13-203ENST00000427191 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
PTPN13-203ENST00000427191 ATRAIDQ6UW56 229 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 IGHV3-64A0A075B6Q5 118 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
PTPN13-203ENST00000427191 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 IGLV3-19P01714 112 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
PTPN13-203ENST00000427191 EML6Q6ZMW3 1958 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms