RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 IGHMP01871 453 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 PPP1R32Q7Z5V6 425 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 CFHR3Q02985 330 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 MESP2Q0VG99 397 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 C8orf46Q8TAG6 207 aa9.38□□□□□ -0.91
POLR2J4-202ENST00000427076 SRRM4A7MD48 611 aaKnown RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 LY6DQ14210 128 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 FCN3O75636 299 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 TIAF1O95411 115 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 IGHG3P01860 377 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 SH2D6Q7Z4S9 175 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 SHANK3Q9BYB0 1731 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 TRPM3Q9HCF6 1732 aaPredicted RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 IGHV4-4A0A075B6R2 117 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 IGHV2OR16-5A0A0B4J2B6 119 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 CCL25O15444 150 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 Q6ZT83 130 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 REG4Q9BYZ8 158 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 GLI3P10071 1580 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 ADAMTSL1Q8N6G6 1762 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 QSER1Q2KHR3 1735 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 LINC01549A6NIU2 74 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 H0YIZ8 118 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 OVOL1O14753 267 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
POLR2J4-202ENST00000427076 PSG7Q13046 419 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 C10orf55Q5SWW7 151 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 NXPH4O95158 308 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 LINC00312Q9Y6C7 94 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 ADCYAP1P18509 176 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 DEFB130BP0DP73 79 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 DEFB130AP0DP74 79 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 MORN2Q502X0 79 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 RPRMLQ8N4K4 120 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 ANKRD29Q8N6D5 301 aa9.36□□□□□ -0.91
POLR2J4-202ENST00000427076 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 U3KQE9 123 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 SS18Q15532 418 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 WIPF2Q8TF74 440 aaPredicted RBP9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 VCYO14598 125 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 UBL5Q9BZL1 73 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 IGHV3-16A0A0C4DH30 117 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 CRLF1O75462 422 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 MMP23AO75900 390 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 FGF6P10767 208 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 IGHV1-2P23083 117 aa9.35□□□□□ -0.91
POLR2J4-202ENST00000427076 ADAMTSL3P82987 1691 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 K7EP34 96 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 CSRP2Q16527 193 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 SP7Q8TDD2 431 aaPredicted RBP9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 KNCNA6PVL3 124 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 NDUFC2O95298 119 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 CLPSP04118 112 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 FOXG1P55316 489 aaPredicted RBP9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 TMEM258P61165 79 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 STRCQ7RTU9 1775 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 SLAQ13239 276 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 SLC25A48Q6ZT89 311 aaKnown RBP9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 HERV-K104P63124 156 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 KLRD1Q13241 179 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
POLR2J4-202ENST00000427076 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 LYPD6Q86Y78 171 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 TMEM133Q9H2Q1 129 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 LYPD6BQ8NI32 183 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 THBDP07204 575 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 CGB3P0DN86 165 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 SCRT2Q9NQ03 307 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 BCORQ6W2J9 1755 aa9.33□□□□□ -0.92
POLR2J4-202ENST00000427076 SLC25A16P16260 332 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms