RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
ERCC3-202ENST00000426778 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
ERCC3-202ENST00000426778 TCF21O43680 179 aa11.5□□□□□ -0.57
ERCC3-202ENST00000426778 CSN3P07498 182 aa11.5□□□□□ -0.57
ERCC3-202ENST00000426778 FAM57AQ8TBR7 257 aa11.5□□□□□ -0.57
ERCC3-202ENST00000426778 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
ERCC3-202ENST00000426778 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.57
ERCC3-202ENST00000426778 PMCHL2Q9BQD1 86 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 FBXL15Q9H469 300 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 VPS13CQ709C8 3753 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 VMA21Q3ZAQ7 101 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 C7orf69Q9H7B7 122 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 LY6HO94772 140 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 NDUFB8O95169 186 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 SSX8Q7RTT4 187 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 Q9H3A6 140 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 RALYQ9UKM9 306 aaKnown RBP11.49□□□□□ -0.57
ERCC3-202ENST00000426778 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
ERCC3-202ENST00000426778 SIAH2O43255 324 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 IGHV1-8P0DP01 117 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
ERCC3-202ENST00000426778 MEF2CQ06413 473 aaPredicted RBP11.48□□□□□ -0.57
ERCC3-202ENST00000426778 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 RBP4P02753 201 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 IGLL1P15814 213 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 RPL27AP46776 148 aaKnown RBP11.48□□□□□ -0.57
ERCC3-202ENST00000426778 COL5A1-AS1Q5SY13 56 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 PERPQ96FX8 193 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 ABHD17AQ96GS6 310 aa11.48□□□□□ -0.57
ERCC3-202ENST00000426778 C21orf62-AS1Q17RA5 79 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 P01737 135 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 PSG1P11464 419 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 MYCNOSP40205 109 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-202ENST00000426778 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 RNASE6Q93091 150 aaKnown RBP11.47□□□□□ -0.57
ERCC3-202ENST00000426778 GPR82Q96P67 336 aa11.47□□□□□ -0.57
ERCC3-202ENST00000426778 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 PRRG2O14669 202 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 PLGLAQ15195 96 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 IGFL3Q6UXB1 125 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
ERCC3-202ENST00000426778 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
ERCC3-202ENST00000426778 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
ERCC3-202ENST00000426778 C2orf70A6NJV1 201 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 E7EQL1 145 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 TCRAP04437 139 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 GP9P14770 177 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 TSPOP30536 169 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 DLX6P56179 175 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 TCTAP57738 103 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 INSIG2Q9Y5U4 225 aa11.46□□□□□ -0.58
ERCC3-202ENST00000426778 CRYABP02511 175 aaKnown RBP11.45□□□□□ -0.58
ERCC3-202ENST00000426778 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
ERCC3-202ENST00000426778 ATP5IP56385 69 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-202ENST00000426778 COX19Q49B96 90 aa11.45□□□□□ -0.58
ERCC3-202ENST00000426778 TMEM155Q4W5P6 130 aa11.45□□□□□ -0.58
ERCC3-202ENST00000426778 DAZAP1Q96EP5 407 aaKnown RBP11.45□□□□□ -0.58
ERCC3-202ENST00000426778 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
ERCC3-202ENST00000426778 HBBP68871 147 aa11.45□□□□□ -0.58
ERCC3-202ENST00000426778 GFRALQ6UXV0 394 aa11.45□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV2-26A0A0B4J1V2 119 aa11.44□□□□□ -0.58
ERCC3-202ENST00000426778 COL8A1P27658 744 aa11.44□□□□□ -0.58
ERCC3-202ENST00000426778 SIGLEC9Q9Y336 463 aa11.44□□□□□ -0.58
ERCC3-202ENST00000426778 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
ERCC3-202ENST00000426778 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
ERCC3-202ENST00000426778 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
ERCC3-202ENST00000426778 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
ERCC3-202ENST00000426778 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 CA7P43166 264 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 C3orf36Q3SXR2 165 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 C22orf15Q8WYQ4 148 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 FBLN7Q53RD9 439 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 OR8B3Q8NGG8 313 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 LINC01560Q8TB33 94 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV1-3A0A0C4DH29 117 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV1-69-2A0A0G2JMI3 117 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 M0R3E3 92 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 HIGD1AQ9Y241 93 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV3OR16-8A0A075B7F1 116 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 CHEK1O14757 476 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms